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A3GALT2 alpha 1,3-galactosyltransferase 2 [ Physeter catodon (sperm whale) ]

Gene ID: 102996822, updated on 10-Mar-2024

Summary

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Gene symbol
A3GALT2
Gene description
alpha 1,3-galactosyltransferase 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Physeter catodon
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Physeteridae; Physeter
Orthologs
human mouse all
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Genomic context

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See A3GALT2 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2023_04 current ASM283717v5 (GCF_002837175.3) 3 NC_041216.1 (9756759..9767930)
102 previous assembly ASM283717v2 (GCF_002837175.2) 3 NC_041216.1 (9756759..9767930)

Chromosome 3 - NC_041216.1Genomic Context describing neighboring genes Neighboring gene toll-like receptor 12 Neighboring gene polyhomeotic homolog 2 Neighboring gene uncharacterized LOC112065300 Neighboring gene zinc finger protein 362 Neighboring gene 60S ribosomal protein L17-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lipid glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-1,3-galactosyltransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002837175.3-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM283717v5 Primary Assembly

Genomic

  1. NC_041216.1 Reference ASM283717v5 Primary Assembly

    Range
    9756759..9767930
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007125114.2 → XP_007125176.2  alpha-1,3-galactosyltransferase 2

    UniProtKB/TrEMBL
    A0A2Y9FJU7
    Conserved Domains (1) summary
    cl11394
    Location:121 → 391
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
Nucleotide Protein
Heading Accession and Version

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