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NXT1 nuclear transport factor 2 like export factor 1 [ Physeter catodon (sperm whale) ]

Gene ID: 102996136, updated on 10-Mar-2024

Summary

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Gene symbol
NXT1
Gene description
nuclear transport factor 2 like export factor 1
See related
Ensembl:ENSPCTG00005022374
Gene type
protein coding
RefSeq status
MODEL
Organism
Physeter catodon
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Physeteridae; Physeter
Orthologs
human mouse all
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Genomic context

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See NXT1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_04 current ASM283717v5 (GCF_002837175.3) Unplaced Scaffold NW_021145865.1 (13357..16409)
102 previous assembly ASM283717v2 (GCF_002837175.2) Unplaced Scaffold NW_021145865.1 (13360..16409)

NW_021145865.1Genomic Context describing neighboring genes Neighboring gene GDNF inducible zinc finger protein 1 Neighboring gene beta-soluble NSF attachment protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in protein import into nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of nuclear pore central transport channel IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
NTF2-related export protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002837175.3-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM283717v5 Primary Assembly

Genomic

  1. NW_021145865.1 Reference ASM283717v5 Primary Assembly

    Range
    13357..16409
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_055083123.1 → XP_054939098.1  NTF2-related export protein 1

    UniProtKB/TrEMBL
    A0A2Y9EEV6

  2. XM_007100509.3 → XP_007100571.1  NTF2-related export protein 1

    See identical proteins and their annotated locations for XP_007100571.1

    UniProtKB/TrEMBL
    A0A2Y9EEV6
    Related
    ENSPCTP00005031491.1, ENSPCTT00005034575.1
    Conserved Domains (1) summary
    cd00780
    Location:12 → 137
    NTF2; Nuclear transport factor 2 (NTF2) domain plays an important role in the trafficking of macromolecules, ions and small molecules between the cytoplasm and nucleus. This bi-directional transport of macromolecules across the nuclear envelope requires many ...

  3. XM_007100510.4 → XP_007100572.1  NTF2-related export protein 1

    See identical proteins and their annotated locations for XP_007100572.1

    UniProtKB/TrEMBL
    A0A2Y9EEV6
    Conserved Domains (1) summary
    cd00780
    Location:12 → 137
    NTF2; Nuclear transport factor 2 (NTF2) domain plays an important role in the trafficking of macromolecules, ions and small molecules between the cytoplasm and nucleus. This bi-directional transport of macromolecules across the nuclear envelope requires many ...
Nucleotide Protein
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