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SULT2B1 sulfotransferase family 2B member 1 [ Physeter catodon (sperm whale) ]

Gene ID: 102993424, updated on 10-Mar-2024

Summary

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Gene symbol
SULT2B1
Gene description
sulfotransferase family 2B member 1
See related
Ensembl:ENSPCTG00005017101
Gene type
protein coding
RefSeq status
MODEL
Organism
Physeter catodon
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Physeteridae; Physeter
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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See SULT2B1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_04 current ASM283717v5 (GCF_002837175.3) Unplaced Scaffold NW_021145602.1 (68301..74099, complement)
102 previous assembly ASM283717v2 (GCF_002837175.2) Unplaced Scaffold NW_021145602.1 (68301..74099, complement)

NW_021145602.1Genomic Context describing neighboring genes Neighboring gene ribosomal protein L18 Neighboring gene family with sequence similarity 83 member E Neighboring gene sperm acrosome associated 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in sulfation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sulfotransferase 2B1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002837175.3-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM283717v5 Primary Assembly

Genomic

  1. NW_021145602.1 Reference ASM283717v5 Primary Assembly

    Range
    68301..74099 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028485131.1 → XP_028340932.1  sulfotransferase 2B1

    UniProtKB/TrEMBL
    A0A455AWL3
    Related
    ENSPCTP00005023857.1, ENSPCTT00005026274.1
    Conserved Domains (1) summary
    pfam00685
    Location:22 → 190
    Sulfotransfer_1; Sulfotransferase domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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