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CHPT1 choline phosphotransferase 1 [ Physeter catodon (sperm whale) ]

Gene ID: 102976930, updated on 10-Mar-2024

Summary

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Gene symbol
CHPT1
Gene description
choline phosphotransferase 1
See related
Ensembl:ENSPCTG00005015686
Gene type
protein coding
RefSeq status
MODEL
Organism
Physeter catodon
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Physeteridae; Physeter
Orthologs
human mouse all
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Genomic context

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See CHPT1 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_04 current ASM283717v5 (GCF_002837175.3) 6 NC_041219.1 (34751121..34787760)
102 previous assembly ASM283717v2 (GCF_002837175.2) 6 NC_041219.1 (34750933..34787757)

Chromosome 6 - NC_041219.1Genomic Context describing neighboring genes Neighboring gene Spi-C transcription factor Neighboring gene myosin binding protein C1 Neighboring gene synaptonemal complex protein 3 Neighboring gene N-acetylglucosamine-1-phosphate transferase subunits alpha and beta Neighboring gene U6 spliceosomal RNA Neighboring gene U6 spliceosomal RNA

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables diacylglycerol cholinephosphotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ethanolaminephosphotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phosphatidylethanolamine biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cholinephosphotransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002837175.3-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM283717v5 Primary Assembly

Genomic

  1. NC_041219.1 Reference ASM283717v5 Primary Assembly

    Range
    34751121..34787760
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024127379.3 → XP_023983147.1  cholinephosphotransferase 1

    UniProtKB/TrEMBL
    A0A2Y9T0W0
    Related
    ENSPCTP00005022164.1, ENSPCTT00005024420.1
    Conserved Domains (1) summary
    cl00453
    Location:25 → 229
    CDP-OH_P_transf; CDP-alcohol phosphatidyltransferase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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