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ACTA1 actin alpha 1, skeletal muscle [ Physeter catodon (sperm whale) ]

Gene ID: 102976743, updated on 10-Mar-2024

Summary

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Gene symbol
ACTA1
Gene description
actin alpha 1, skeletal muscle
See related
Ensembl:ENSPCTG00005016061
Gene type
protein coding
RefSeq status
MODEL
Organism
Physeter catodon
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Physeteridae; Physeter
Orthologs
human mouse all
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Genomic context

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See ACTA1 in Genome Data Viewer
Location:
chromosome: 20
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_04 current ASM283717v5 (GCF_002837175.3) 20 NC_041233.1 (1175682..1178578, complement)
102 previous assembly ASM283717v2 (GCF_002837175.2) 20 NC_041233.1 (1175682..1178575, complement)

Chromosome 20 - NC_041233.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114484514 Neighboring gene uncharacterized LOC112062623 Neighboring gene nucleoporin 133 Neighboring gene ATP binding cassette subfamily B member 10

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in skeletal muscle thin filament assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in actin filament IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in stress fiber IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in striated muscle thin filament IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
actin, alpha skeletal muscle

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002837175.3-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM283717v5 Primary Assembly

Genomic

  1. NC_041233.1 Reference ASM283717v5 Primary Assembly

    Range
    1175682..1178578 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024117554.3 → XP_023973322.1  actin, alpha skeletal muscle

    UniProtKB/TrEMBL
    A0A2Y9S7L7
    Related
    ENSPCTP00005022463.1, ENSPCTT00005024735.1
    Conserved Domains (1) summary
    PTZ00281
    Location:4 → 377
    PTZ00281; actin; Provisional
Nucleotide Protein
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