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KIF1B kinesin family member 1B [ Physeter catodon (sperm whale) ]

Gene ID: 102974145, updated on 10-Mar-2024

Summary

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Gene symbol
KIF1B
Gene description
kinesin family member 1B
See related
Ensembl:ENSPCTG00005003146
Gene type
protein coding
RefSeq status
MODEL
Organism
Physeter catodon
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Physeteridae; Physeter
Orthologs
human mouse all
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Genomic context

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See KIF1B in Genome Data Viewer
Location:
chromosome: 3
Exon count:
48
Annotation release Status Assembly Chr Location
RS_2023_04 current ASM283717v5 (GCF_002837175.3) 3 NC_041216.1 (24563426..24701821)
102 previous assembly ASM283717v2 (GCF_002837175.2) 3 NC_041216.1 (24563428..24703521)

Chromosome 3 - NC_041216.1Genomic Context describing neighboring genes Neighboring gene castor zinc finger 1 Neighboring gene small nuclear ribonucleoprotein G-like Neighboring gene U6 spliceosomal RNA Neighboring gene U6 spliceosomal RNA Neighboring gene transfer RNA glycine (anticodon CCC) Neighboring gene uncharacterized LOC114485950 Neighboring gene phosphogluconate dehydrogenase Neighboring gene centromere protein S

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables microtubule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables microtubule motor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in microtubule-based movement IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
kinesin-like protein KIF1B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002837175.3-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM283717v5 Primary Assembly

Genomic

  1. NC_041216.1 Reference ASM283717v5 Primary Assembly

    Range
    24563426..24701821
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028487854.2 → XP_028343655.1  kinesin-like protein KIF1B isoform X2

    UniProtKB/TrEMBL
    A0A455B3Y7
    Related
    ENSPCTP00005004805.1, ENSPCTT00005005285.1
    Conserved Domains (7) summary
    cd00060
    Location:486 → 590
    FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
    cd01233
    Location:1651 → 1753
    PH_KIFIA_KIFIB; KIFIA and KIFIB protein pleckstrin homology (PH) domain
    cd01365
    Location:4 → 355
    KISc_KIF1A_KIF1B; Kinesin motor domain, KIF1_like proteins
    pfam16183
    Location:352 → 509
    Kinesin_assoc; Kinesin-associated
    pfam12423
    Location:799 → 846
    KIF1B; Kinesin protein 1B
    pfam12473
    Location:1221 → 1367
    DUF3694; Kinesin protein
    cl09111
    Location:616 → 671
    Prefoldin; Prefoldin is a hexameric molecular chaperone complex, found in both eukaryotes and archaea, that binds and stabilizes newly synthesized polypeptides allowing them to fold correctly. The complex contains two alpha and four beta subunits, the two subunits ...

  2. XM_028487857.2 → XP_028343658.1  kinesin-like protein KIF1B isoform X3

    UniProtKB/TrEMBL
    A0A455B6L9
    Conserved Domains (7) summary
    PRK09510
    Location:593 → 679
    tolA; cell envelope integrity inner membrane protein TolA; Provisional
    cd00060
    Location:486 → 590
    FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
    cd01233
    Location:1568 → 1670
    PH_KIFIA_KIFIB; KIFIA and KIFIB protein pleckstrin homology (PH) domain
    cd01365
    Location:4 → 355
    KISc_KIF1A_KIF1B; Kinesin motor domain, KIF1_like proteins
    pfam16183
    Location:352 → 509
    Kinesin_assoc; Kinesin-associated
    pfam12423
    Location:799 → 845
    KIF1B; Kinesin protein 1B
    pfam12473
    Location:1138 → 1284
    DUF3694; Kinesin protein

  3. XM_028487859.2 → XP_028343660.1  kinesin-like protein KIF1B isoform X4

    UniProtKB/TrEMBL
    A0A455B3Z3
    Related
    ENSPCTP00005004823.1, ENSPCTT00005005303.1
    Conserved Domains (3) summary
    cd00060
    Location:486 → 590
    FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
    cd01365
    Location:4 → 355
    KISc_KIF1A_KIF1B; Kinesin motor domain, KIF1_like proteins
    pfam16183
    Location:352 → 509
    Kinesin_assoc; Kinesin-associated

  4. XM_028487851.2 → XP_028343652.1  kinesin-like protein KIF1B isoform X1

    UniProtKB/TrEMBL
    A0A455B4C8
    Related
    ENSPCTP00005004769.1, ENSPCTT00005005248.1
    Conserved Domains (7) summary
    cd00060
    Location:526 → 630
    FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
    cd01233
    Location:1691 → 1793
    PH_KIFIA_KIFIB; KIFIA and KIFIB protein pleckstrin homology (PH) domain
    cd01365
    Location:4 → 355
    KISc_KIF1A_KIF1B; Kinesin motor domain, KIF1_like proteins
    pfam16183
    Location:352 → 549
    Kinesin_assoc; Kinesin-associated
    pfam12423
    Location:839 → 886
    KIF1B; Kinesin protein 1B
    pfam12473
    Location:1261 → 1407
    DUF3694; Kinesin protein
    cl09111
    Location:656 → 711
    Prefoldin; Prefoldin is a hexameric molecular chaperone complex, found in both eukaryotes and archaea, that binds and stabilizes newly synthesized polypeptides allowing them to fold correctly. The complex contains two alpha and four beta subunits, the two subunits ...
Nucleotide Protein
Heading Accession and Version

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