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INPP5F inositol polyphosphate-5-phosphatase F [ Physeter catodon (sperm whale) ]

Gene ID: 102973331, updated on 10-Mar-2024

Summary

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Gene symbol
INPP5F
Gene description
inositol polyphosphate-5-phosphatase F
See related
Ensembl:ENSPCTG00005021967
Gene type
protein coding
RefSeq status
MODEL
Organism
Physeter catodon
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Physeteridae; Physeter
Orthologs
human mouse all
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Genomic context

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See INPP5F in Genome Data Viewer
Location:
chromosome: 20
Exon count:
19
Annotation release Status Assembly Chr Location
RS_2023_04 current ASM283717v5 (GCF_002837175.3) 20 NC_041233.1 (73226239..73320383)
102 previous assembly ASM283717v2 (GCF_002837175.2) 20 NC_041233.1 (73226276..73320371)

Chromosome 20 - NC_041233.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102980376 Neighboring gene nanos C2HC-type zinc finger 1 Neighboring gene minichromosome maintenance complex binding protein Neighboring gene metallothionein-I, hippocampal-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol-4-phosphate phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phosphatidylinositol dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of endocytic recycling IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in clathrin-coated endocytic vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in early endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphatidylinositide phosphatase SAC2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002837175.3-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM283717v5 Primary Assembly

Genomic

  1. NC_041233.1 Reference ASM283717v5 Primary Assembly

    Range
    73226239..73320383
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024121235.3 → XP_023977003.1  phosphatidylinositide phosphatase SAC2 isoform X1

    UniProtKB/TrEMBL
    A0A2Y9SF53
    Conserved Domains (2) summary
    pfam12456
    Location:634 → 736
    hSac2; Inositol phosphatase
    cl27434
    Location:50 → 606
    Syja_N; SacI homology domain

  2. XM_024121236.3 → XP_023977004.1  phosphatidylinositide phosphatase SAC2 isoform X2

    UniProtKB/TrEMBL
    A0A2Y9SMP5
    Related
    ENSPCTP00005030806.1, ENSPCTT00005033852.1
    Conserved Domains (2) summary
    pfam12456
    Location:595 → 697
    hSac2; Inositol phosphatase
    cl27434
    Location:50 → 567
    Syja_N; SacI homology domain

  3. XM_028482052.2 → XP_028337853.1  phosphatidylinositide phosphatase SAC2 isoform X4

    UniProtKB/TrEMBL
    A0A455APJ2
    Related
    ENSPCTP00005030835.1, ENSPCTT00005033883.1
    Conserved Domains (2) summary
    COG5329
    Location:50 → 567
    COG5329; Phosphoinositide polyphosphatase (Sac family) [Signal transduction mechanisms]
    pfam12456
    Location:595 → 697
    hSac2; Inositol phosphatase

  4. XM_024121237.3 → XP_023977005.1  phosphatidylinositide phosphatase SAC2 isoform X3

    UniProtKB/TrEMBL
    A0A2Y9SKY0
    Conserved Domains (2) summary
    pfam12456
    Location:427 → 529
    hSac2; Inositol phosphatase
    cl27434
    Location:7 → 399
    Syja_N; SacI homology domain
Nucleotide Protein
Heading Accession and Version

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