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CHST1 carbohydrate sulfotransferase 1 [ Panthera tigris (tiger) ]

Gene ID: 102972740, updated on 10-Mar-2024

Summary

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Gene symbol
CHST1
Gene description
carbohydrate sulfotransferase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Panthera tigris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Pantherinae; Panthera
Orthologs
human mouse all
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Genomic context

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See CHST1 in Genome Data Viewer
Location:
chromosome: D1
Exon count:
10
Annotation release Status Assembly Chr Location
102 current P.tigris_Pti1_mat1.1 (GCF_018350195.1) D1 NC_056669.1 (97031424..97057213, complement)

Chromosome D1 - NC_056669.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC122231162 Neighboring gene uncharacterized LOC102951663 Neighboring gene uncharacterized LOC122231258 Neighboring gene uncharacterized LOC122231256

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_056669.1 Chromosome D1 Reference P.tigris_Pti1_mat1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables N-acetylglucosamine 6-O-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables keratan sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-acetylglucosamine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in keratan sulfate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carbohydrate sulfotransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Panthera tigris Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P.tigris_Pti1_mat1.1 Primary Assembly

Genomic

  1. NC_056669.1 Reference P.tigris_Pti1_mat1.1 Primary Assembly

    Range
    97031424..97057213 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042958788.1 → XP_042814722.1  carbohydrate sulfotransferase 1

    Conserved Domains (1) summary
    pfam00685
    Location:200 → 384
    Sulfotransfer_1; Sulfotransferase domain

  2. XM_042958790.1 → XP_042814724.1  carbohydrate sulfotransferase 1

    Conserved Domains (1) summary
    pfam00685
    Location:200 → 384
    Sulfotransfer_1; Sulfotransferase domain

  3. XM_042958787.1 → XP_042814721.1  carbohydrate sulfotransferase 1

    Conserved Domains (1) summary
    pfam00685
    Location:200 → 384
    Sulfotransfer_1; Sulfotransferase domain

  4. XM_042958789.1 → XP_042814723.1  carbohydrate sulfotransferase 1

    Conserved Domains (1) summary
    pfam00685
    Location:200 → 384
    Sulfotransfer_1; Sulfotransferase domain

  5. XM_042958791.1 → XP_042814725.1  carbohydrate sulfotransferase 1

    Conserved Domains (1) summary
    pfam00685
    Location:200 → 384
    Sulfotransfer_1; Sulfotransferase domain

RNA

  1. XR_006208444.1 RNA Sequence

  2. XR_006208443.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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