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DEGS1 delta 4-desaturase, sphingolipid 1 [ Panthera tigris (tiger) ]

Gene ID: 102972723, updated on 10-Mar-2024

Summary

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Gene symbol
DEGS1
Gene description
delta 4-desaturase, sphingolipid 1
See related
Ensembl:ENSPTIG00000013966
Gene type
protein coding
RefSeq status
MODEL
Organism
Panthera tigris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Pantherinae; Panthera
Orthologs
human mouse all
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Genomic context

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See DEGS1 in Genome Data Viewer
Location:
chromosome: F3
Exon count:
4
Annotation release Status Assembly Chr Location
102 current P.tigris_Pti1_mat1.1 (GCF_018350195.1) F3 NC_056678.1 (1373957..1382884)

Chromosome F3 - NC_056678.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC122235887 Neighboring gene F-box protein 28 Neighboring gene uncharacterized LOC122235777 Neighboring gene nuclear VCP like Neighboring gene cornichon family member 4

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_056678.1 Chromosome F3 Reference P.tigris_Pti1_mat1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sphingolipid delta-4 desaturase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ceramide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sphingolipid delta(4)-desaturase DES1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Panthera tigris Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P.tigris_Pti1_mat1.1 Primary Assembly

Genomic

  1. NC_056678.1 Reference P.tigris_Pti1_mat1.1 Primary Assembly

    Range
    1373957..1382884
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042976276.1 → XP_042832210.1  sphingolipid delta(4)-desaturase DES1

    UniProtKB/TrEMBL
    A0A8C9K695
    Conserved Domains (1) summary
    cd03508
    Location:26 → 315
    Delta4-sphingolipid-FADS-like; The Delta4-sphingolipid Fatty Acid Desaturase (Delta4-sphingolipid-FADS)-like CD includes the integral-membrane enzymes, dihydroceramide Delta-4 desaturase, involved in the synthesis of sphingosine; and the human membrane fatty acid (lipid) desaturase ...
Nucleotide Protein
Heading Accession and Version

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