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MDH2 malate dehydrogenase 2 [ Panthera tigris (tiger) ]

Gene ID: 102972029, updated on 26-Jun-2024

Summary

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Gene symbol
MDH2
Gene description
malate dehydrogenase 2
See related
Ensembl:ENSPTIG00000005908
Gene type
protein coding
RefSeq status
MODEL
Organism
Panthera tigris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Pantherinae; Panthera
Orthologs
human mouse all
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Genomic context

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See MDH2 in Genome Data Viewer
Location:
chromosome: E3
Exon count:
9
Annotation release Status Assembly Chr Location
102 current P.tigris_Pti1_mat1.1 (GCF_018350195.1) E3 NC_056675.1 (9334199..9349719, complement)

Chromosome E3 - NC_056675.1Genomic Context describing neighboring genes Neighboring gene heat shock protein family B (small) member 1 Neighboring gene serine/arginine repetitive matrix 3 Neighboring gene serine/threonine/tyrosine interacting like 1 Neighboring gene transmembrane protein 120A

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_056675.1 Chromosome E3 Reference P.tigris_Pti1_mat1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-malate dehydrogenase (NAD+) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in malate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in tricarboxylic acid cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
malate dehydrogenase, mitochondrial
Names
malate dehydrogenase 2, NAD (mitochondrial)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Panthera tigris Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P.tigris_Pti1_mat1.1 Primary Assembly

Genomic

  1. NC_056675.1 Reference P.tigris_Pti1_mat1.1 Primary Assembly

    Range
    9334199..9349719 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042970821.1 → XP_042826755.1  malate dehydrogenase, mitochondrial

    UniProtKB/TrEMBL
    A0A8C9J944
    Conserved Domains (1) summary
    cd01337
    Location:26 → 334
    MDH_glyoxysomal_mitochondrial; Glyoxysomal and mitochondrial malate dehydrogenases
Nucleotide Protein
Heading Accession and Version

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