U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

ITPKB inositol-trisphosphate 3-kinase B [ Panthera tigris (tiger) ]

Gene ID: 102971949, updated on 10-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
ITPKB
Gene description
inositol-trisphosphate 3-kinase B
Gene type
protein coding
RefSeq status
MODEL
Organism
Panthera tigris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Pantherinae; Panthera
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See ITPKB in Genome Data Viewer
Location:
chromosome: F3
Exon count:
8
Annotation release Status Assembly Chr Location
102 current P.tigris_Pti1_mat1.1 (GCF_018350195.1) F3 NC_056678.1 (3056715..3145257, complement)

Chromosome F3 - NC_056678.1Genomic Context describing neighboring genes Neighboring gene U2 spliceosomal RNA Neighboring gene uncharacterized LOC122235809 Neighboring gene stum, mechanosensory transduction mediator homolog Neighboring gene uncharacterized LOC122235984 Neighboring gene presenilin 2

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_056678.1 Chromosome F3 Reference P.tigris_Pti1_mat1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables inositol tetrakisphosphate kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables inositol-1,4,5-trisphosphate 3-kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in inositol phosphate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
inositol-trisphosphate 3-kinase B

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Panthera tigris Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P.tigris_Pti1_mat1.1 Primary Assembly

Genomic

  1. NC_056678.1 Reference P.tigris_Pti1_mat1.1 Primary Assembly

    Range
    3056715..3145257 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042976772.1 → XP_042832706.1  inositol-trisphosphate 3-kinase B

    Conserved Domains (2) summary
    PHA03307
    Location:172 → 513
    PHA03307; transcriptional regulator ICP4; Provisional
    cl12283
    Location:754 → 992
    IPK; Inositol polyphosphate kinase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.