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CSE1L chromosome segregation 1 like [ Panthera tigris (tiger) ]

Gene ID: 102971571, updated on 10-Mar-2024

Summary

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Gene symbol
CSE1L
Gene description
chromosome segregation 1 like
See related
Ensembl:ENSPTIG00000011919
Gene type
protein coding
RefSeq status
MODEL
Organism
Panthera tigris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Pantherinae; Panthera
Orthologs
human mouse all
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Genomic context

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See CSE1L in Genome Data Viewer
Location:
chromosome: A3
Exon count:
27
Annotation release Status Assembly Chr Location
102 current P.tigris_Pti1_mat1.1 (GCF_018350195.1) A3 NC_056662.1 (12416370..12461589, complement)

Chromosome A3 - NC_056662.1Genomic Context describing neighboring genes Neighboring gene DEAD-box helicase 27 Neighboring gene staufen double-stranded RNA binding protein 1 Neighboring gene uncharacterized LOC122237168 Neighboring gene ARF guanine nucleotide exchange factor 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_056662.1 Chromosome A3 Reference P.tigris_Pti1_mat1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nuclear export signal receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables small GTPase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein export from nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein import into nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nuclear envelope IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
exportin-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Panthera tigris Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P.tigris_Pti1_mat1.1 Primary Assembly

Genomic

  1. NC_056662.1 Reference P.tigris_Pti1_mat1.1 Primary Assembly

    Range
    12416370..12461589 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042980202.1 → XP_042836136.1  exportin-2

    UniProtKB/TrEMBL
    A0A8C9JRA5
    Conserved Domains (3) summary
    smart00913
    Location:31 → 104
    IBN_N; Importin-beta N-terminal domain
    pfam03378
    Location:529 → 964
    CAS_CSE1; CAS/CSE protein, C-terminus
    pfam08506
    Location:158 → 528
    Cse1

  2. XM_042980203.1 → XP_042836137.1  exportin-2

    UniProtKB/TrEMBL
    A0A8C9JRA5
    Conserved Domains (3) summary
    smart00913
    Location:31 → 104
    IBN_N; Importin-beta N-terminal domain
    pfam03378
    Location:529 → 964
    CAS_CSE1; CAS/CSE protein, C-terminus
    pfam08506
    Location:158 → 528
    Cse1

  3. XM_042980204.1 → XP_042836138.1  exportin-2

    UniProtKB/TrEMBL
    A0A8C9JRA5
    Conserved Domains (3) summary
    smart00913
    Location:31 → 104
    IBN_N; Importin-beta N-terminal domain
    pfam03378
    Location:529 → 964
    CAS_CSE1; CAS/CSE protein, C-terminus
    pfam08506
    Location:158 → 528
    Cse1
Nucleotide Protein
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