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GALM galactose mutarotase [ Panthera tigris (tiger) ]

Gene ID: 102971497, updated on 10-Mar-2024

Summary

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Gene symbol
GALM
Gene description
galactose mutarotase
See related
Ensembl:ENSPTIG00000008704
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Panthera tigris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Pantherinae; Panthera
Orthologs
human mouse all
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Genomic context

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See GALM in Genome Data Viewer
Location:
chromosome: A3
Exon count:
8
Annotation release Status Assembly Chr Location
102 current P.tigris_Pti1_mat1.1 (GCF_018350195.1) A3 NC_056662.1 (107991118..108106420, complement)

Chromosome A3 - NC_056662.1Genomic Context describing neighboring genes Neighboring gene tetratricopeptide repeat protein 39B-like Neighboring gene uncharacterized LOC122237399 Neighboring gene serine and arginine rich splicing factor 7 Neighboring gene heterogeneous nuclear ribonucleoprotein L like Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC122237058

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_056662.1 Chromosome A3 Reference P.tigris_Pti1_mat1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Generation and analysis of a large-scale expressed sequence tags from a full-length enriched cDNA library of Siberian tiger (Panthera tigris altaica). Guo Y, et al. Gene, 2014 May 15. PMID 24630959
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables aldose 1-epimerase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables carbohydrate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in galactose catabolic process via UDP-galactose IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glucose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
galactose mutarotase
NP_001277522.1
XP_042835585.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001290593.1 → NP_001277522.1  galactose mutarotase

    See identical proteins and their annotated locations for NP_001277522.1

    Status: PROVISIONAL

    Source sequence(s)
    KF896420
    UniProtKB/TrEMBL
    W6FFI1
    Related
    ENSPTIP00000006920.1, ENSPTIT00000010751.1
    Conserved Domains (1) summary
    cd09019
    Location:29 → 339
    galactose_mutarotase_like; galactose mutarotase_like

RefSeqs of Annotated Genomes: Panthera tigris Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P.tigris_Pti1_mat1.1 Primary Assembly

Genomic

  1. NC_056662.1 Reference P.tigris_Pti1_mat1.1 Primary Assembly

    Range
    107991118..108106420 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042979651.1 → XP_042835585.1  galactose mutarotase isoform X1

    Conserved Domains (1) summary
    cd09019
    Location:5 → 280
    galactose_mutarotase_like; galactose mutarotase_like
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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