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PIGB phosphatidylinositol glycan anchor biosynthesis class B [ Panthera tigris (tiger) ]

Gene ID: 102971494, updated on 10-Mar-2024

Summary

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Gene symbol
PIGB
Gene description
phosphatidylinositol glycan anchor biosynthesis class B
See related
Ensembl:ENSPTIG00000016452
Gene type
protein coding
RefSeq status
MODEL
Organism
Panthera tigris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Pantherinae; Panthera
Orthologs
human mouse all
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Genomic context

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See PIGB in Genome Data Viewer
Location:
chromosome: B3
Exon count:
12
Annotation release Status Assembly Chr Location
102 current P.tigris_Pti1_mat1.1 (GCF_018350195.1) B3 NC_056665.1 (49007913..49047606, complement)

Chromosome B3 - NC_056665.1Genomic Context describing neighboring genes Neighboring gene dynein axonemal assembly factor 4 Neighboring gene piercer of microtubule wall 2 Neighboring gene cell cycle progression 1 Neighboring gene U6 spliceosomal RNA Neighboring gene PIGB opposite strand 1 Neighboring gene RAB27A, member RAS oncogene family

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_056665.1 Chromosome B3 Reference P.tigris_Pti1_mat1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,2-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GPI anchor biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GPI mannosyltransferase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Panthera tigris Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P.tigris_Pti1_mat1.1 Primary Assembly

Genomic

  1. NC_056665.1 Reference P.tigris_Pti1_mat1.1 Primary Assembly

    Range
    49007913..49047606 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015537448.2 → XP_015392934.1  GPI mannosyltransferase 3 isoform X2

    UniProtKB/TrEMBL
    A0A8C9M9H7
    Conserved Domains (1) summary
    cl21590
    Location:52 → 329
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase

  2. XM_007081869.3 → XP_007081931.1  GPI mannosyltransferase 3 isoform X1

    UniProtKB/TrEMBL
    A0A8C9KHU6, A0A8C9M9H7
    Related
    ENSPTIP00000018301.1
    Conserved Domains (1) summary
    cl21590
    Location:53 → 517
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase
Nucleotide Protein
Heading Accession and Version

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