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GALNT7 polypeptide N-acetylgalactosaminyltransferase 7 [ Panthera tigris (tiger) ]

Gene ID: 102971381, updated on 10-Mar-2024

Summary

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Gene symbol
GALNT7
Gene description
polypeptide N-acetylgalactosaminyltransferase 7
See related
Ensembl:ENSPTIG00000015312
Gene type
protein coding
RefSeq status
MODEL
Organism
Panthera tigris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Pantherinae; Panthera
Orthologs
human mouse all
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Genomic context

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See GALNT7 in Genome Data Viewer
Location:
chromosome: B1
Exon count:
16
Annotation release Status Assembly Chr Location
102 current P.tigris_Pti1_mat1.1 (GCF_018350195.1) B1 NC_056663.1 (55063752..55208713, complement)

Chromosome B1 - NC_056663.1Genomic Context describing neighboring genes Neighboring gene Sin3A associated protein 30 Neighboring gene stimulator of chondrogenesis 1 Neighboring gene high mobility group box 2 Neighboring gene transfer RNA lysine (anticodon UUU) Neighboring gene polypeptide N-acetylgalactosaminyltransferase like 6 Neighboring gene uncharacterized LOC107181072

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_056663.1 Chromosome B1 Reference P.tigris_Pti1_mat1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
N-acetylgalactosaminyltransferase 7
Names
UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Panthera tigris Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P.tigris_Pti1_mat1.1 Primary Assembly

Genomic

  1. NC_056663.1 Reference P.tigris_Pti1_mat1.1 Primary Assembly

    Range
    55063752..55208713 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042983615.1 → XP_042839549.1  N-acetylgalactosaminyltransferase 7 isoform X1

    UniProtKB/TrEMBL
    A0A8C9K422
    Conserved Domains (2) summary
    cd02510
    Location:210 → 518
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:534 → 649
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

  2. XM_042983616.1 → XP_042839550.1  N-acetylgalactosaminyltransferase 7 isoform X2

    UniProtKB/TrEMBL
    A0A8C9K422
    Conserved Domains (2) summary
    cd02510
    Location:210 → 518
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:534 → 649
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

  3. XM_042983617.1 → XP_042839551.1  N-acetylgalactosaminyltransferase 7 isoform X3

    UniProtKB/TrEMBL
    A0A8C9K422
    Conserved Domains (2) summary
    cd02510
    Location:160 → 468
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:484 → 599
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

  4. XM_042983620.1 → XP_042839554.1  N-acetylgalactosaminyltransferase 7 isoform X3

    UniProtKB/TrEMBL
    A0A8C9K422
    Conserved Domains (2) summary
    cd02510
    Location:160 → 468
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:484 → 599
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

  5. XM_042983618.1 → XP_042839552.1  N-acetylgalactosaminyltransferase 7 isoform X3

    UniProtKB/TrEMBL
    A0A8C9K422
    Conserved Domains (2) summary
    cd02510
    Location:160 → 468
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:484 → 599
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
Nucleotide Protein
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