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TALDO1 transaldolase 1 [ Panthera tigris (tiger) ]

Gene ID: 102970770, updated on 10-Mar-2024

Summary

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Gene symbol
TALDO1
Gene description
transaldolase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Panthera tigris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Pantherinae; Panthera
Orthologs
human mouse all
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Genomic context

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See TALDO1 in Genome Data Viewer
Location:
chromosome: D1
Exon count:
8
Annotation release Status Assembly Chr Location
102 current P.tigris_Pti1_mat1.1 (GCF_018350195.1) D1 NC_056669.1 (114143951..114152596, complement)

Chromosome D1 - NC_056669.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 25 member 22 Neighboring gene cell cycle exit and neuronal differentiation 1 Neighboring gene glutamine amidotransferase class 1 domain containing 1 Neighboring gene uncharacterized LOC122231544 Neighboring gene EPS8 signaling adaptor L2 Neighboring gene uncharacterized LOC122231543

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_056669.1 Chromosome D1 Reference P.tigris_Pti1_mat1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transaldolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in pentose-phosphate shunt IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in pentose-phosphate shunt, non-oxidative branch IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in intracellular anatomical structure IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transaldolase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Panthera tigris Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P.tigris_Pti1_mat1.1 Primary Assembly

Genomic

  1. NC_056669.1 Reference P.tigris_Pti1_mat1.1 Primary Assembly

    Range
    114143951..114152596 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042958035.1 → XP_042813969.1  transaldolase

    Conserved Domains (1) summary
    PRK05269
    Location:11 → 329
    PRK05269; transaldolase B; Provisional
Nucleotide Protein
Heading Accession and Version

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