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PIGN phosphatidylinositol glycan anchor biosynthesis class N [ Panthera tigris (tiger) ]

Gene ID: 102970025, updated on 10-Mar-2024

Summary

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Gene symbol
PIGN
Gene description
phosphatidylinositol glycan anchor biosynthesis class N
See related
Ensembl:ENSPTIG00000000681
Gene type
protein coding
RefSeq status
MODEL
Organism
Panthera tigris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Pantherinae; Panthera
Orthologs
human mouse all
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Genomic context

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See PIGN in Genome Data Viewer
Location:
chromosome: D3
Exon count:
33
Annotation release Status Assembly Chr Location
102 current P.tigris_Pti1_mat1.1 (GCF_018350195.1) D3 NC_056671.1 (79434396..79537575, complement)

Chromosome D3 - NC_056671.1Genomic Context describing neighboring genes Neighboring gene ring finger protein 152 Neighboring gene ubiquitin-conjugating enzyme E2 C-like Neighboring gene uncharacterized LOC122232534 Neighboring gene RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing Neighboring gene heterogeneous nuclear ribonucleoprotein A1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_056671.1 Chromosome D3 Reference P.tigris_Pti1_mat1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mannose-ethanolamine phosphotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GPI anchor biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GPI ethanolamine phosphate transferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Panthera tigris Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P.tigris_Pti1_mat1.1 Primary Assembly

Genomic

  1. NC_056671.1 Reference P.tigris_Pti1_mat1.1 Primary Assembly

    Range
    79434396..79537575 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007080452.3 → XP_007080514.1  GPI ethanolamine phosphate transferase 1 isoform X1

    See identical proteins and their annotated locations for XP_007080514.1

    UniProtKB/TrEMBL
    A0A8C9J979, A0A8C9J996
    Conserved Domains (2) summary
    cd16020
    Location:40 → 345
    GPI_EPT_1; GPI ethanolamine phosphate transferase 1; PIG-N
    pfam04987
    Location:431 → 884
    PigN; Phosphatidylinositolglycan class N (PIG-N)

  2. XM_007080455.3 → XP_007080517.1  GPI ethanolamine phosphate transferase 1 isoform X1

    See identical proteins and their annotated locations for XP_007080517.1

    UniProtKB/TrEMBL
    A0A8C9J979, A0A8C9J996
    Related
    ENSPTIP00000001238.1
    Conserved Domains (2) summary
    cd16020
    Location:40 → 345
    GPI_EPT_1; GPI ethanolamine phosphate transferase 1; PIG-N
    pfam04987
    Location:431 → 884
    PigN; Phosphatidylinositolglycan class N (PIG-N)

  3. XM_007080457.3 → XP_007080519.1  GPI ethanolamine phosphate transferase 1 isoform X3

    UniProtKB/TrEMBL
    A0A8C9J0M6, A0A8C9M2G5
    Related
    ENSPTIP00000001220.1
    Conserved Domains (3) summary
    COG1524
    Location:12 → 280
    Npp1; Predicted pyrophosphatase or phosphodiesterase, AlkP superfamily [General function prediction only]
    pfam04987
    Location:406 → 823
    PigN; Phosphatidylinositolglycan class N (PIG-N)
    cd16020
    Location:40 → 345
    GPI_EPT_1; GPI ethanolamine phosphate transferase 1; PIG-N

  4. XM_042962089.1 → XP_042818023.1  GPI ethanolamine phosphate transferase 1 isoform X2

    UniProtKB/TrEMBL
    A0A8C9J996
    Conserved Domains (1) summary
    cd16020
    Location:40 → 345
    GPI_EPT_1; GPI ethanolamine phosphate transferase 1; PIG-N

  5. XM_015536820.2 → XP_015392306.1  GPI ethanolamine phosphate transferase 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C9J979, A0A8C9J996
    Related
    ENSPTIP00000001214.1
    Conserved Domains (2) summary
    cd16020
    Location:40 → 345
    GPI_EPT_1; GPI ethanolamine phosphate transferase 1; PIG-N
    pfam04987
    Location:431 → 884
    PigN; Phosphatidylinositolglycan class N (PIG-N)

  6. XM_042962088.1 → XP_042818022.1  GPI ethanolamine phosphate transferase 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C9J979, A0A8C9J996
    Conserved Domains (2) summary
    cd16020
    Location:40 → 345
    GPI_EPT_1; GPI ethanolamine phosphate transferase 1; PIG-N
    pfam04987
    Location:431 → 884
    PigN; Phosphatidylinositolglycan class N (PIG-N)
Nucleotide Protein
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