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GNPAT glyceronephosphate O-acyltransferase [ Panthera tigris (tiger) ]

Gene ID: 102968870, updated on 10-Mar-2024

Summary

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Gene symbol
GNPAT
Gene description
glyceronephosphate O-acyltransferase
See related
Ensembl:ENSPTIG00000011644
Gene type
protein coding
RefSeq status
MODEL
Organism
Panthera tigris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Pantherinae; Panthera
Orthologs
human mouse all
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Genomic context

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See GNPAT in Genome Data Viewer
Location:
chromosome: D2
Exon count:
18
Annotation release Status Assembly Chr Location
102 current P.tigris_Pti1_mat1.1 (GCF_018350195.1) D2 NC_056670.1 (16809186..16841059, complement)

Chromosome D2 - NC_056670.1Genomic Context describing neighboring genes Neighboring gene SprT-like N-terminal domain Neighboring gene exocyst complex component 8 Neighboring gene 40S small subunit processome assembly factor 1 Neighboring gene tripartite motif containing 67

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_056670.1 Chromosome D2 Reference P.tigris_Pti1_mat1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycerone-phosphate O-acyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ether lipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in peroxisomal membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in peroxisome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dihydroxyacetone phosphate acyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Panthera tigris Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P.tigris_Pti1_mat1.1 Primary Assembly

Genomic

  1. NC_056670.1 Reference P.tigris_Pti1_mat1.1 Primary Assembly

    Range
    16809186..16841059 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042959981.1 → XP_042815915.1  dihydroxyacetone phosphate acyltransferase isoform X1

    UniProtKB/TrEMBL
    A0A8C9JXD1
    Conserved Domains (2) summary
    cd07993
    Location:134 → 339
    LPLAT_DHAPAT-like; Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: GPAT-like
    PTZ00374
    Location:74 → 611
    PTZ00374; dihydroxyacetone phosphate acyltransferase; Provisional

  2. XM_007086018.3 → XP_007086080.2  dihydroxyacetone phosphate acyltransferase isoform X2

    UniProtKB/TrEMBL
    A0A8C9JXD1
    Conserved Domains (2) summary
    cd07993
    Location:110 → 315
    LPLAT_DHAPAT-like; Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: GPAT-like
    PTZ00374
    Location:50 → 587
    PTZ00374; dihydroxyacetone phosphate acyltransferase; Provisional

  3. XM_042959982.1 → XP_042815916.1  dihydroxyacetone phosphate acyltransferase isoform X3

    UniProtKB/TrEMBL
    A0A8C9JXD1
    Conserved Domains (2) summary
    cd07993
    Location:83 → 288
    LPLAT_DHAPAT-like; Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: GPAT-like
    PTZ00374
    Location:23 → 560
    PTZ00374; dihydroxyacetone phosphate acyltransferase; Provisional
Nucleotide Protein
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