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LRPPRC leucine rich pentatricopeptide repeat containing [ Panthera tigris (tiger) ]

Gene ID: 102968058, updated on 10-Mar-2024

Summary

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Gene symbol
LRPPRC
Gene description
leucine rich pentatricopeptide repeat containing
See related
Ensembl:ENSPTIG00000000933
Gene type
protein coding
RefSeq status
MODEL
Organism
Panthera tigris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Pantherinae; Panthera
Orthologs
human mouse all
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Genomic context

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See LRPPRC in Genome Data Viewer
Location:
chromosome: A3
Exon count:
38
Annotation release Status Assembly Chr Location
102 current P.tigris_Pti1_mat1.1 (GCF_018350195.1) A3 NC_056662.1 (63208517..63320371, complement)

Chromosome A3 - NC_056662.1Genomic Context describing neighboring genes Neighboring gene dynein cytoplasmic 2 light intermediate chain 1 Neighboring gene ATP binding cassette subfamily G member 5 Neighboring gene ATP binding cassette subfamily G member 8 Neighboring gene protein phosphatase, Mg2+/Mn2+ dependent 1B Neighboring gene solute carrier family 3 member 1 Neighboring gene prolyl endopeptidase like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_056662.1 Chromosome A3 Reference P.tigris_Pti1_mat1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
leucine-rich PPR motif-containing protein, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Panthera tigris Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P.tigris_Pti1_mat1.1 Primary Assembly

Genomic

  1. NC_056662.1 Reference P.tigris_Pti1_mat1.1 Primary Assembly

    Range
    63208517..63320371 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007097885.2 → XP_007097947.2  leucine-rich PPR motif-containing protein, mitochondrial

    UniProtKB/TrEMBL
    A0A8C9IZ57
    Conserved Domains (3) summary
    PLN03218
    Location:183 → 300
    PLN03218; maturation of RBCL 1; Provisional
    sd00004
    Location:199 → 226
    PPR; PPR repeat [structural motif]
    pfam13812
    Location:148 → 209
    PPR_3; Pentatricopeptide repeat domain
Nucleotide Protein
Heading Accession and Version

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