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SPAM1 sperm adhesion molecule 1 [ Panthera tigris (tiger) ]

Gene ID: 102964738, updated on 10-Mar-2024

Summary

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Gene symbol
SPAM1
Gene description
sperm adhesion molecule 1
See related
Ensembl:ENSPTIG00000008304
Gene type
protein coding
RefSeq status
MODEL
Organism
Panthera tigris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Pantherinae; Panthera
Orthologs
human all
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Genomic context

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See SPAM1 in Genome Data Viewer
Location:
chromosome: A2
Exon count:
7
Annotation release Status Assembly Chr Location
102 current P.tigris_Pti1_mat1.1 (GCF_018350195.1) A2 NC_056661.1 (139785173..139810192)

Chromosome A2 - NC_056661.1Genomic Context describing neighboring genes Neighboring gene hyaluronidase-4-like Neighboring gene hyaluronidase 4 Neighboring gene gametocyte-specific factor 1-like Neighboring gene transmembrane protein 229A

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_056661.1 Chromosome A2 Reference P.tigris_Pti1_mat1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hyalurononglucosaminidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in fusion of sperm to egg plasma membrane involved in single fertilization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in hyaluronan catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in acrosomal vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hyaluronidase PH-20

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Panthera tigris Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P.tigris_Pti1_mat1.1 Primary Assembly

Genomic

  1. NC_056661.1 Reference P.tigris_Pti1_mat1.1 Primary Assembly

    Range
    139785173..139810192
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007089194.3 → XP_007089256.1  hyaluronidase PH-20

    UniProtKB/TrEMBL
    A0A8C9JCY7, A0A8C9JUA8
    Related
    ENSPTIP00000006364.1
    Conserved Domains (1) summary
    pfam01630
    Location:42 → 370
    Glyco_hydro_56; Hyaluronidase

  2. XM_015540692.2 → XP_015396178.1  hyaluronidase PH-20

    UniProtKB/TrEMBL
    A0A8C9JCY7, A0A8C9JUA8
    Related
    ENSPTIP00000006357.1
    Conserved Domains (1) summary
    pfam01630
    Location:42 → 370
    Glyco_hydro_56; Hyaluronidase

  3. XM_042971169.1 → XP_042827103.1  hyaluronidase PH-20

    UniProtKB/TrEMBL
    A0A8C9JCY7, A0A8C9JUA8
    Conserved Domains (1) summary
    pfam01630
    Location:42 → 370
    Glyco_hydro_56; Hyaluronidase

  4. XM_042971159.1 → XP_042827093.1  hyaluronidase PH-20

    UniProtKB/TrEMBL
    A0A8C9JCY7, A0A8C9JUA8
    Conserved Domains (1) summary
    pfam01630
    Location:42 → 370
    Glyco_hydro_56; Hyaluronidase
Nucleotide Protein
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