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GALNT12 polypeptide N-acetylgalactosaminyltransferase 12 [ Panthera tigris (tiger) ]

Gene ID: 102964262, updated on 10-Mar-2024

Summary

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Gene symbol
GALNT12
Gene description
polypeptide N-acetylgalactosaminyltransferase 12
See related
Ensembl:ENSPTIG00000018132
Gene type
protein coding
RefSeq status
MODEL
Organism
Panthera tigris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Pantherinae; Panthera
Orthologs
human mouse all
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Genomic context

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See GALNT12 in Genome Data Viewer
Location:
chromosome: D4
Exon count:
10
Annotation release Status Assembly Chr Location
102 current P.tigris_Pti1_mat1.1 (GCF_018350195.1) D4 NC_056672.1 (60657214..60694264)

Chromosome D4 - NC_056672.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102950498 Neighboring gene ankyrin repeat and sterile alpha motif domain containing 6 Neighboring gene uncharacterized LOC122233146 Neighboring gene collagen type XV alpha 1 chain

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_056672.1 Chromosome D4 Reference P.tigris_Pti1_mat1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polypeptide N-acetylgalactosaminyltransferase 12
Names
UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 12 (GalNAc-T12)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Panthera tigris Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P.tigris_Pti1_mat1.1 Primary Assembly

Genomic

  1. NC_056672.1 Reference P.tigris_Pti1_mat1.1 Primary Assembly

    Range
    60657214..60694264
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007089324.3 → XP_007089386.2  polypeptide N-acetylgalactosaminyltransferase 12

    UniProtKB/TrEMBL
    A0A8C9KTH3
    Conserved Domains (2) summary
    cd02510
    Location:137 → 431
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    cd00161
    Location:445 → 574
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...
Nucleotide Protein
Heading Accession and Version

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