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AGPAT5 1-acylglycerol-3-phosphate O-acyltransferase 5 [ Panthera tigris (tiger) ]

Gene ID: 102963863, updated on 10-Mar-2024

Summary

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Gene symbol
AGPAT5
Gene description
1-acylglycerol-3-phosphate O-acyltransferase 5
Gene type
protein coding
RefSeq status
MODEL
Organism
Panthera tigris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Pantherinae; Panthera
Orthologs
human mouse all
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Genomic context

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See AGPAT5 in Genome Data Viewer
Location:
chromosome: B1
Exon count:
10
Annotation release Status Assembly Chr Location
102 current P.tigris_Pti1_mat1.1 (GCF_018350195.1) B1 NC_056663.1 (6707110..6774010)

Chromosome B1 - NC_056663.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC122237820 Neighboring gene uncharacterized LOC107180275 Neighboring gene uncharacterized LOC122237821 Neighboring gene XK related 5

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_056663.1 Chromosome B1 Reference P.tigris_Pti1_mat1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endomembrane system IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
1-acyl-sn-glycerol-3-phosphate acyltransferase epsilon

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Panthera tigris Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P.tigris_Pti1_mat1.1 Primary Assembly

Genomic

  1. NC_056663.1 Reference P.tigris_Pti1_mat1.1 Primary Assembly

    Range
    6707110..6774010
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042982862.1 → XP_042838796.1  1-acyl-sn-glycerol-3-phosphate acyltransferase epsilon isoform X1

    Conserved Domains (1) summary
    cd07990
    Location:63 → 264
    LPLAT_LCLAT1-like; Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LCLAT1-like

  2. XM_042982864.1 → XP_042838798.1  1-acyl-sn-glycerol-3-phosphate acyltransferase epsilon isoform X3

    Conserved Domains (1) summary
    cd07990
    Location:63 → 264
    LPLAT_LCLAT1-like; Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LCLAT1-like

  3. XM_042982863.1 → XP_042838797.1  1-acyl-sn-glycerol-3-phosphate acyltransferase epsilon isoform X2

    UniProtKB/TrEMBL
    A0A8C9JN09
    Conserved Domains (2) summary
    cd07990
    Location:63 → 264
    LPLAT_LCLAT1-like; Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LCLAT1-like
    pfam16076
    Location:259 → 320
    Acyltransf_C; Acyltransferase C-terminus
Nucleotide Protein
Heading Accession and Version

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