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LDHD lactate dehydrogenase D [ Panthera tigris (tiger) ]

Gene ID: 102962815, updated on 10-Mar-2024

Summary

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Gene symbol
LDHD
Gene description
lactate dehydrogenase D
See related
Ensembl:ENSPTIG00000009958
Gene type
protein coding
RefSeq status
MODEL
Organism
Panthera tigris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Pantherinae; Panthera
Orthologs
human mouse all
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Genomic context

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See LDHD in Genome Data Viewer
Location:
chromosome: E2
Exon count:
11
Annotation release Status Assembly Chr Location
102 current P.tigris_Pti1_mat1.1 (GCF_018350195.1) E2 NC_056674.1 (49297043..49304030, complement)

Chromosome E2 - NC_056674.1Genomic Context describing neighboring genes Neighboring gene WD repeat domain 59 Neighboring gene zinc and ring finger 1 Neighboring gene uncharacterized LOC122234375 Neighboring gene uncharacterized LOC122234159 Neighboring gene ZFP1 zinc finger protein Neighboring gene chymotrypsinogen B

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_056674.1 Chromosome E2 Reference P.tigris_Pti1_mat1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables D-lactate dehydrogenase (cytochrome) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables D-lactate dehydrogenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables FAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lactate catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable D-lactate dehydrogenase, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Panthera tigris Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P.tigris_Pti1_mat1.1 Primary Assembly

Genomic

  1. NC_056674.1 Reference P.tigris_Pti1_mat1.1 Primary Assembly

    Range
    49297043..49304030 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042970560.1 → XP_042826494.1  probable D-lactate dehydrogenase, mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A8C9JJC1
    Conserved Domains (1) summary
    PLN02805
    Location:23 → 485
    PLN02805; D-lactate dehydrogenase [cytochrome]

  2. XM_042970561.1 → XP_042826495.1  probable D-lactate dehydrogenase, mitochondrial isoform X3

    UniProtKB/TrEMBL
    A0A8C9JJC1
    Conserved Domains (1) summary
    PLN02805
    Location:23 → 508
    PLN02805; D-lactate dehydrogenase [cytochrome]

  3. XM_015538010.2 → XP_015393496.2  probable D-lactate dehydrogenase, mitochondrial isoform X2

    UniProtKB/TrEMBL
    A0A8C9JJC1
    Conserved Domains (1) summary
    PLN02805
    Location:7 → 425
    PLN02805; D-lactate dehydrogenase [cytochrome]
Nucleotide Protein
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