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TKT transketolase [ Panthera tigris (tiger) ]

Gene ID: 102959573, updated on 10-Mar-2024

Summary

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Gene symbol
TKT
Gene description
transketolase
See related
Ensembl:ENSPTIG00000014165
Gene type
protein coding
RefSeq status
MODEL
Organism
Panthera tigris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Pantherinae; Panthera
Orthologs
human mouse all
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Genomic context

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See TKT in Genome Data Viewer
Location:
chromosome: A2
Exon count:
16
Annotation release Status Assembly Chr Location
102 current P.tigris_Pti1_mat1.1 (GCF_018350195.1) A2 NC_056661.1 (21679299..21705323, complement)

Chromosome A2 - NC_056661.1Genomic Context describing neighboring genes Neighboring gene RFT1 homolog Neighboring gene protein kinase C delta Neighboring gene uncharacterized LOC122236672 Neighboring gene decapping mRNA 1A Neighboring gene 60S ribosomal protein L10-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_056661.1 Chromosome A2 Reference P.tigris_Pti1_mat1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables thiamine pyrophosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transketolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in pentose-phosphate shunt, non-oxidative branch IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ribose phosphate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular exosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transketolase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Panthera tigris Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P.tigris_Pti1_mat1.1 Primary Assembly

Genomic

  1. NC_056661.1 Reference P.tigris_Pti1_mat1.1 Primary Assembly

    Range
    21679299..21705323 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042979160.1 → XP_042835094.1  transketolase isoform X1

    UniProtKB/TrEMBL
    A0A8C9JWY0
    Conserved Domains (1) summary
    PRK05899
    Location:8 → 620
    PRK05899; transketolase; Reviewed

  2. XM_042979161.1 → XP_042835095.1  transketolase isoform X2

    UniProtKB/TrEMBL
    A0A8C9JWY0
    Conserved Domains (1) summary
    PRK05899
    Location:39 → 627
    PRK05899; transketolase; Reviewed
Nucleotide Protein
Heading Accession and Version

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