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GYG2 glycogenin 2 [ Panthera tigris (tiger) ]

Gene ID: 102959321, updated on 10-Mar-2024

Summary

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Gene symbol
GYG2
Gene description
glycogenin 2
See related
Ensembl:ENSPTIG00000005764
Gene type
protein coding
RefSeq status
MODEL
Organism
Panthera tigris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Pantherinae; Panthera
Orthologs
human all
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Genomic context

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See GYG2 in Genome Data Viewer
Location:
chromosome: X
Exon count:
11
Annotation release Status Assembly Chr Location
102 current P.tigris_Pti1_mat1.1 (GCF_018350195.1) X NC_056677.1 (1499021..1529482)

Chromosome X - NC_056677.1Genomic Context describing neighboring genes Neighboring gene CD99 molecule (Xg blood group) Neighboring gene Xg glycoprotein (Xg blood group) Neighboring gene arylsulfatase D Neighboring gene arylsulfatase L

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_056677.1 Chromosome X Reference P.tigris_Pti1_mat1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycogenin-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Panthera tigris Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P.tigris_Pti1_mat1.1 Primary Assembly

Genomic

  1. NC_056677.1 Reference P.tigris_Pti1_mat1.1 Primary Assembly

    Range
    1499021..1529482
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042975099.1 → XP_042831033.1  glycogenin-2 isoform X1

    UniProtKB/TrEMBL
    A0A8C9J4X5
    Conserved Domains (2) summary
    cd02537
    Location:6 → 257
    GT8_Glycogenin; Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen
    PHA03307
    Location:262 → 389
    PHA03307; transcriptional regulator ICP4; Provisional

  2. XM_042975100.1 → XP_042831034.1  glycogenin-2 isoform X2

    UniProtKB/TrEMBL
    A0A8C9JAT1
    Conserved Domains (1) summary
    cd02537
    Location:6 → 257
    GT8_Glycogenin; Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen
Nucleotide Protein
Heading Accession and Version

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