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AMACR alpha-methylacyl-CoA racemase [ Panthera tigris (tiger) ]

Gene ID: 102958054, updated on 10-Mar-2024

Summary

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Gene symbol
AMACR
Gene description
alpha-methylacyl-CoA racemase
See related
Ensembl:ENSPTIG00000016026
Gene type
protein coding
RefSeq status
MODEL
Organism
Panthera tigris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Pantherinae; Panthera
Orthologs
human mouse all
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Genomic context

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See AMACR in Genome Data Viewer
Location:
chromosome: A1
Exon count:
5
Annotation release Status Assembly Chr Location
102 current P.tigris_Pti1_mat1.1 (GCF_018350195.1) A1 NC_056660.1 (210938228..210957948)

Chromosome A1 - NC_056660.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC122231851 Neighboring gene C1q and TNF related 3 Neighboring gene protein SET-like Neighboring gene solute carrier family 45 member 2 Neighboring gene relaxin family peptide receptor 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_056660.1 Chromosome A1 Reference P.tigris_Pti1_mat1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-methylacyl-CoA racemase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in bile acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-methylacyl-CoA racemase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Panthera tigris Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P.tigris_Pti1_mat1.1 Primary Assembly

Genomic

  1. NC_056660.1 Reference P.tigris_Pti1_mat1.1 Primary Assembly

    Range
    210938228..210957948
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007097426.3 → XP_007097488.2  alpha-methylacyl-CoA racemase isoform X1

    UniProtKB/TrEMBL
    A0A8C9KCP2
    Conserved Domains (1) summary
    COG1804
    Location:3 → 373
    CaiB; Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases [Lipid transport and metabolism]

  2. XM_007097427.3 → XP_007097489.2  alpha-methylacyl-CoA racemase isoform X2

    Conserved Domains (1) summary
    cl19215
    Location:3 → 131
    CoA_transf_3; CoA-transferase family III
Nucleotide Protein
Heading Accession and Version

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