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DDOST dolichyl-diphosphooligosaccharide--protein glycosyltransferase non-catalytic subunit [ Panthera tigris (tiger) ]

Gene ID: 102956282, updated on 10-Mar-2024

Summary

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Gene symbol
DDOST
Gene description
dolichyl-diphosphooligosaccharide--protein glycosyltransferase non-catalytic subunit
See related
Ensembl:ENSPTIG00000000110
Gene type
protein coding
RefSeq status
MODEL
Organism
Panthera tigris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Pantherinae; Panthera
Orthologs
human mouse all
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Genomic context

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See DDOST in Genome Data Viewer
Location:
chromosome: C1
Exon count:
11
Annotation release Status Assembly Chr Location
102 current P.tigris_Pti1_mat1.1 (GCF_018350195.1) C1 NC_056667.1 (14996117..15003670, complement)

Chromosome C1 - NC_056667.1Genomic Context describing neighboring genes Neighboring gene transfer RNA glutamic acid (anticodon CUC) Neighboring gene PTEN induced kinase 1 Neighboring gene kinesin family member 17 Neighboring gene uncharacterized LOC122241174 Neighboring gene uncharacterized LOC122241289 Neighboring gene SH2 domain containing 5

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_056667.1 Chromosome C1 Reference P.tigris_Pti1_mat1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in protein N-linked glycosylation via asparagine IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of oligosaccharyltransferase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Panthera tigris Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P.tigris_Pti1_mat1.1 Primary Assembly

Genomic

  1. NC_056667.1 Reference P.tigris_Pti1_mat1.1 Primary Assembly

    Range
    14996117..15003670 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007083749.3 → XP_007083811.1  dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit

    UniProtKB/TrEMBL
    A0A8C9IYL0
    Related
    ENSPTIP00000000054.1
    Conserved Domains (1) summary
    pfam03345
    Location:31 → 438
    DDOST_48kD; Oligosaccharyltransferase 48 kDa subunit beta
Nucleotide Protein
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