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PGD phosphogluconate dehydrogenase [ Panthera tigris (tiger) ]

Gene ID: 102953665, updated on 10-Mar-2024

Summary

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Gene symbol
PGD
Gene description
phosphogluconate dehydrogenase
See related
Ensembl:ENSPTIG00000009806
Gene type
protein coding
RefSeq status
MODEL
Organism
Panthera tigris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Pantherinae; Panthera
Orthologs
human mouse all
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Genomic context

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See PGD in Genome Data Viewer
Location:
chromosome: C1
Exon count:
13
Annotation release Status Assembly Chr Location
102 current P.tigris_Pti1_mat1.1 (GCF_018350195.1) C1 NC_056667.1 (7417781..7434982)

Chromosome C1 - NC_056667.1Genomic Context describing neighboring genes Neighboring gene kinesin family member 1B Neighboring gene uncharacterized LOC122241423 Neighboring gene uncharacterized LOC122241424 Neighboring gene uncharacterized LOC122241425 Neighboring gene centromere protein S-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_056667.1 Chromosome C1 Reference P.tigris_Pti1_mat1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NADP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphogluconate dehydrogenase (decarboxylating) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in D-gluconate catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in pentose-phosphate shunt IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in pentose-phosphate shunt, oxidative branch IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
6-phosphogluconate dehydrogenase, decarboxylating

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Panthera tigris Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P.tigris_Pti1_mat1.1 Primary Assembly

Genomic

  1. NC_056667.1 Reference P.tigris_Pti1_mat1.1 Primary Assembly

    Range
    7417781..7434982
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042997512.1 → XP_042853446.1  6-phosphogluconate dehydrogenase, decarboxylating

    UniProtKB/TrEMBL
    A0A8C9JJA4
    Conserved Domains (1) summary
    PRK09287
    Location:14 → 470
    PRK09287; NADP-dependent phosphogluconate dehydrogenase
Nucleotide Protein
Heading Accession and Version

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