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B4GALNT3 beta-1,4-N-acetyl-galactosaminyltransferase 3 [ Panthera tigris (tiger) ]

Gene ID: 102953154, updated on 10-Mar-2024

Summary

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Gene symbol
B4GALNT3
Gene description
beta-1,4-N-acetyl-galactosaminyltransferase 3
See related
Ensembl:ENSPTIG00000005475
Gene type
protein coding
RefSeq status
MODEL
Organism
Panthera tigris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Pantherinae; Panthera
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: B4
Exon count:
22
Annotation release Status Assembly Chr Location
102 current P.tigris_Pti1_mat1.1 (GCF_018350195.1) B4 NC_056666.1 (36834896..36936652, complement)

Chromosome B4 - NC_056666.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC122240581 Neighboring gene ninjurin 2 Neighboring gene 60S ribosomal protein L23a-like Neighboring gene coiled-coil domain containing 77

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_056666.1 Chromosome B4 Reference P.tigris_Pti1_mat1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acetylgalactosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi cisterna membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,4-N-acetylgalactosaminyltransferase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Panthera tigris Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P.tigris_Pti1_mat1.1 Primary Assembly

Genomic

  1. NC_056666.1 Reference P.tigris_Pti1_mat1.1 Primary Assembly

    Range
    36834896..36936652 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042993669.1 → XP_042849603.1  beta-1,4-N-acetylgalactosaminyltransferase 3

    UniProtKB/TrEMBL
    A0A8C9J3Q9
    Conserved Domains (2) summary
    smart00758
    Location:176 → 313
    PA14; domain in bacterial beta-glucosidases other glycosidases, glycosyltransferases, proteases, amidases, yeast adhesins, and bacterial toxins
    cl11394
    Location:826 → 1034
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
Nucleotide Protein
Heading Accession and Version

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