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SOAT1 sterol O-acyltransferase 1 [ Panthera tigris (tiger) ]

Gene ID: 102951637, updated on 10-Mar-2024

Summary

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Gene symbol
SOAT1
Gene description
sterol O-acyltransferase 1
See related
Ensembl:ENSPTIG00000005668
Gene type
protein coding
RefSeq status
MODEL
Organism
Panthera tigris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Pantherinae; Panthera
Orthologs
human mouse all
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Genomic context

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See SOAT1 in Genome Data Viewer
Location:
chromosome: F3
Exon count:
18
Annotation release Status Assembly Chr Location
102 current P.tigris_Pti1_mat1.1 (GCF_018350195.1) F3 NC_056678.1 (21119883..21198329)

Chromosome F3 - NC_056678.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC122235911 Neighboring gene torsin family 3 member A Neighboring gene ABL proto-oncogene 2, non-receptor tyrosine kinase Neighboring gene 40S ribosomal protein S2-like Neighboring gene heat shock cognate 71 kDa protein-like Neighboring gene U6 spliceosomal RNA Neighboring gene U6 spliceosomal RNA Neighboring gene 40S ribosomal protein S15a-like Neighboring gene axonemal dynein light chain domain containing 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_056678.1 Chromosome F3 Reference P.tigris_Pti1_mat1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cholesterol O-acyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cholesterol binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables fatty-acyl-CoA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cholesterol efflux IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cholesterol homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cholesterol metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sterol O-acyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Panthera tigris Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P.tigris_Pti1_mat1.1 Primary Assembly

Genomic

  1. NC_056678.1 Reference P.tigris_Pti1_mat1.1 Primary Assembly

    Range
    21119883..21198329
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042975794.1 → XP_042831728.1  sterol O-acyltransferase 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C9J4C6, A0A8C9JAL5
    Conserved Domains (1) summary
    pfam03062
    Location:170 → 519
    MBOAT; membrane-bound O-acyltransferase family

  2. XM_042975795.1 → XP_042831729.1  sterol O-acyltransferase 1 isoform X2

    UniProtKB/TrEMBL
    A0A8C9J4C6
    Conserved Domains (1) summary
    pfam03062
    Location:105 → 454
    MBOAT; membrane-bound O-acyltransferase family
Nucleotide Protein
Heading Accession and Version

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