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SGPL1 sphingosine-1-phosphate lyase 1 [ Panthera tigris (tiger) ]

Gene ID: 102951165, updated on 10-Mar-2024

Summary

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Gene symbol
SGPL1
Gene description
sphingosine-1-phosphate lyase 1
See related
Ensembl:ENSPTIG00000011047
Gene type
protein coding
RefSeq status
MODEL
Organism
Panthera tigris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Pantherinae; Panthera
Orthologs
human mouse all
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Genomic context

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See SGPL1 in Genome Data Viewer
Location:
chromosome: D2
Exon count:
18
Annotation release Status Assembly Chr Location
102 current P.tigris_Pti1_mat1.1 (GCF_018350195.1) D2 NC_056670.1 (31011457..31086238)

Chromosome D2 - NC_056670.1Genomic Context describing neighboring genes Neighboring gene ADAM metallopeptidase with thrombospondin type 1 motif 14 Neighboring gene perforin 1 Neighboring gene uncharacterized LOC122231962 Neighboring gene thymus, brain and testes associated Neighboring gene pterin-4 alpha-carbinolamine dehydratase 1 Neighboring gene unc-5 netrin receptor B

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_056670.1 Chromosome D2 Reference P.tigris_Pti1_mat1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables pyridoxal phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sphinganine-1-phosphate aldolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carboxylic acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sphingolipid catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sphingosine-1-phosphate lyase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Panthera tigris Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P.tigris_Pti1_mat1.1 Primary Assembly

Genomic

  1. NC_056670.1 Reference P.tigris_Pti1_mat1.1 Primary Assembly

    Range
    31011457..31086238
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042960865.1 → XP_042816799.1  sphingosine-1-phosphate lyase 1 isoform X2

    Conserved Domains (1) summary
    cd06450
    Location:249 → 610
    DOPA_deC_like; DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and ...

  2. XM_042960861.1 → XP_042816795.1  sphingosine-1-phosphate lyase 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C9JV08
    Conserved Domains (1) summary
    cd06450
    Location:146 → 507
    DOPA_deC_like; DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and ...

  3. XM_042960863.1 → XP_042816797.1  sphingosine-1-phosphate lyase 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C9JV08
    Conserved Domains (1) summary
    cd06450
    Location:146 → 507
    DOPA_deC_like; DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and ...

  4. XM_042960859.1 → XP_042816793.1  sphingosine-1-phosphate lyase 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C9JV08
    Conserved Domains (1) summary
    cd06450
    Location:146 → 507
    DOPA_deC_like; DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and ...

  5. XM_042960862.1 → XP_042816796.1  sphingosine-1-phosphate lyase 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C9JV08
    Conserved Domains (1) summary
    cd06450
    Location:146 → 507
    DOPA_deC_like; DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and ...

  6. XM_042960864.1 → XP_042816798.1  sphingosine-1-phosphate lyase 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C9JV08
    Conserved Domains (1) summary
    cd06450
    Location:146 → 507
    DOPA_deC_like; DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and ...
Nucleotide Protein
Heading Accession and Version

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