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L2HGDH L-2-hydroxyglutarate dehydrogenase [ Panthera tigris (tiger) ]

Gene ID: 102951061, updated on 10-Mar-2024

Summary

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Gene symbol
L2HGDH
Gene description
L-2-hydroxyglutarate dehydrogenase
See related
Ensembl:ENSPTIG00000013340
Gene type
protein coding
RefSeq status
MODEL
Organism
Panthera tigris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Pantherinae; Panthera
Orthologs
human mouse all
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Genomic context

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See L2HGDH in Genome Data Viewer
Location:
chromosome: B3
Exon count:
12
Annotation release Status Assembly Chr Location
102 current P.tigris_Pti1_mat1.1 (GCF_018350195.1) B3 NC_056665.1 (97569582..97612439, complement)

Chromosome B3 - NC_056665.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC122239600 Neighboring gene SOS Ras/Rho guanine nucleotide exchange factor 2 Neighboring gene spidroin-2-like Neighboring gene distal membrane arm assembly component 2 like Neighboring gene cyclin dependent kinase like 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_056665.1 Chromosome B3 Reference P.tigris_Pti1_mat1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables (S)-2-hydroxy-acid oxidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables 2-hydroxyglutarate dehydrogenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
L-2-hydroxyglutarate dehydrogenase, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Panthera tigris Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P.tigris_Pti1_mat1.1 Primary Assembly

Genomic

  1. NC_056665.1 Reference P.tigris_Pti1_mat1.1 Primary Assembly

    Range
    97569582..97612439 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007097602.3 → XP_007097664.2  L-2-hydroxyglutarate dehydrogenase, mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A8C9K314
    Conserved Domains (1) summary
    PRK11728
    Location:61 → 457
    PRK11728; L-2-hydroxyglutarate oxidase

  2. XM_042989655.1 → XP_042845589.1  L-2-hydroxyglutarate dehydrogenase, mitochondrial isoform X2

    UniProtKB/TrEMBL
    A0A8C9K314
    Conserved Domains (1) summary
    PRK11728
    Location:35 → 431
    PRK11728; L-2-hydroxyglutarate oxidase

  3. XM_042989656.1 → XP_042845590.1  L-2-hydroxyglutarate dehydrogenase, mitochondrial isoform X2

    UniProtKB/TrEMBL
    A0A8C9K314
    Conserved Domains (1) summary
    PRK11728
    Location:35 → 431
    PRK11728; L-2-hydroxyglutarate oxidase
Nucleotide Protein
Heading Accession and Version

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