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ABAT 4-aminobutyrate aminotransferase [ Panthera tigris (tiger) ]

Gene ID: 102950542, updated on 18-Sep-2024

Summary

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Gene symbol
ABAT
Gene description
4-aminobutyrate aminotransferase
See related
Ensembl:ENSPTIG00000015424
Gene type
protein coding
RefSeq status
MODEL
Organism
Panthera tigris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Pantherinae; Panthera
Orthologs
human mouse all
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Genomic context

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See ABAT in Genome Data Viewer
Location:
chromosome: E3
Exon count:
18
Annotation release Status Assembly Chr Location
102 current P.tigris_Pti1_mat1.1 (GCF_018350195.1) E3 NC_056675.1 (34120308..34210265, complement)

Chromosome E3 - NC_056675.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102971268 Neighboring gene phosphomannomutase 2 Neighboring gene transmembrane protein 186 Neighboring gene methyltransferase 22, Kin17 lysine Neighboring gene transmembrane protein 114

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_056675.1 Chromosome E3 Reference P.tigris_Pti1_mat1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables pyridoxal phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in gamma-aminobutyric acid catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
4-aminobutyrate aminotransferase, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Panthera tigris Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P.tigris_Pti1_mat1.1 Primary Assembly

Genomic

  1. NC_056675.1 Reference P.tigris_Pti1_mat1.1 Primary Assembly

    Range
    34120308..34210265 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042972496.1 → XP_042828430.1  4-aminobutyrate aminotransferase, mitochondrial

    UniProtKB/TrEMBL
    A0A8C9K1M2
    Conserved Domains (1) summary
    TIGR00699
    Location:34 → 496
    GABAtrns_euk; 4-aminobutyrate aminotransferase, eukaryotic type

  2. XM_042972497.1 → XP_042828431.1  4-aminobutyrate aminotransferase, mitochondrial

    UniProtKB/TrEMBL
    A0A8C9K1M2
    Conserved Domains (1) summary
    TIGR00699
    Location:34 → 496
    GABAtrns_euk; 4-aminobutyrate aminotransferase, eukaryotic type
Nucleotide Protein
Heading Accession and Version

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