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ST8SIA5 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5 [ Panthera tigris (tiger) ]

Gene ID: 102950460, updated on 10-Mar-2024

Summary

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Gene symbol
ST8SIA5
Gene description
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5
See related
Ensembl:ENSPTIG00000021493
Gene type
protein coding
RefSeq status
MODEL
Organism
Panthera tigris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Pantherinae; Panthera
Orthologs
human mouse all
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Genomic context

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See ST8SIA5 in Genome Data Viewer
Location:
chromosome: D3
Exon count:
9
Annotation release Status Assembly Chr Location
102 current P.tigris_Pti1_mat1.1 (GCF_018350195.1) D3 NC_056671.1 (66524983..66585158, complement)

Chromosome D3 - NC_056671.1Genomic Context describing neighboring genes Neighboring gene arkadia (RNF111) C-terminal like ring finger ubiquitin ligase 2C Neighboring gene lipoxygenase homology PLAT domains 1 Neighboring gene uncharacterized LOC102950761 Neighboring gene 40S ribosomal protein S25-like Neighboring gene protein inhibitor of activated STAT 2 Neighboring gene uncharacterized LOC122232734 Neighboring gene katanin catalytic subunit A1 like 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_056671.1 Chromosome D3 Reference P.tigris_Pti1_mat1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-N-acetylneuraminate alpha-2,8-sialyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-glycan processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in oligosaccharide metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-2,8-sialyltransferase 8E

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Panthera tigris Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P.tigris_Pti1_mat1.1 Primary Assembly

Genomic

  1. NC_056671.1 Reference P.tigris_Pti1_mat1.1 Primary Assembly

    Range
    66524983..66585158 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042962106.1 → XP_042818040.1  alpha-2,8-sialyltransferase 8E isoform X6

    UniProtKB/TrEMBL
    A0A8C9KR39
    Conserved Domains (1) summary
    pfam00777
    Location:117 → 370
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  2. XM_042962102.1 → XP_042818036.1  alpha-2,8-sialyltransferase 8E isoform X2

  3. XM_042962104.1 → XP_042818038.1  alpha-2,8-sialyltransferase 8E isoform X4

    UniProtKB/TrEMBL
    A0A8C9KR39
    Conserved Domains (1) summary
    pfam00777
    Location:153 → 406
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  4. XM_042962103.1 → XP_042818037.1  alpha-2,8-sialyltransferase 8E isoform X3

  5. XM_042962109.1 → XP_042818043.1  alpha-2,8-sialyltransferase 8E isoform X9

  6. XM_042962107.1 → XP_042818041.1  alpha-2,8-sialyltransferase 8E isoform X7

  7. XM_042962101.1 → XP_042818035.1  alpha-2,8-sialyltransferase 8E isoform X1

  8. XM_042962108.1 → XP_042818042.1  alpha-2,8-sialyltransferase 8E isoform X8

    UniProtKB/TrEMBL
    A0A8C9KR39

  9. XM_042962105.1 → XP_042818039.1  alpha-2,8-sialyltransferase 8E isoform X5

Nucleotide Protein
Heading Accession and Version

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