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P3H2 prolyl 3-hydroxylase 2 [ Panthera tigris (tiger) ]

Gene ID: 102950281, updated on 10-Mar-2024

Summary

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Gene symbol
P3H2
Gene description
prolyl 3-hydroxylase 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Panthera tigris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Pantherinae; Panthera
Also known as
LEPREL1
Orthologs
human mouse all
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Genomic context

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See P3H2 in Genome Data Viewer
Location:
chromosome: C2
Exon count:
15
Annotation release Status Assembly Chr Location
102 current P.tigris_Pti1_mat1.1 (GCF_018350195.1) C2 NC_056668.1 (77166247..77315069)

Chromosome C2 - NC_056668.1Genomic Context describing neighboring genes Neighboring gene claudin 16 Neighboring gene claudin 1 Neighboring gene tumor protein p63 Neighboring gene tumor protein p63 regulated 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_056668.1 Chromosome C2 Reference P.tigris_Pti1_mat1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-ascorbic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables procollagen-proline 3-dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in collagen metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
prolyl 3-hydroxylase 2
Names
leprecan-like 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Panthera tigris Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P.tigris_Pti1_mat1.1 Primary Assembly

Genomic

  1. NC_056668.1 Reference P.tigris_Pti1_mat1.1 Primary Assembly

    Range
    77166247..77315069
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007083551.2 → XP_007083613.2  prolyl 3-hydroxylase 2

    UniProtKB/TrEMBL
    A0A8C9K5D2
    Conserved Domains (2) summary
    smart00702
    Location:471 → 669
    P4Hc; Prolyl 4-hydroxylase alpha subunit homologues
    TIGR03302
    Location:313 → 374
    OM_YfiO; outer membrane assembly lipoprotein YfiO
Nucleotide Protein
Heading Accession and Version

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