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B4GALT7 beta-1,4-galactosyltransferase 7 [ Panthera tigris (tiger) ]

Gene ID: 102949589, updated on 10-Mar-2024

Summary

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Gene symbol
B4GALT7
Gene description
beta-1,4-galactosyltransferase 7
Gene type
protein coding
RefSeq status
MODEL
Organism
Panthera tigris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Pantherinae; Panthera
Orthologs
human mouse all
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Genomic context

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See B4GALT7 in Genome Data Viewer
Location:
chromosome: A1
Exon count:
8
Annotation release Status Assembly Chr Location
102 current P.tigris_Pti1_mat1.1 (GCF_018350195.1) A1 NC_056660.1 (91839690..91849443, complement)

Chromosome A1 - NC_056660.1Genomic Context describing neighboring genes Neighboring gene NEDD4 binding protein 3 Neighboring gene uncharacterized LOC102949406 Neighboring gene transmembrane p24 trafficking protein 9 Neighboring gene transmembrane emp24 domain-containing protein 9-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_056660.1 Chromosome A1 Reference P.tigris_Pti1_mat1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables xylosylprotein 4-beta-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,4-galactosyltransferase 7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Panthera tigris Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P.tigris_Pti1_mat1.1 Primary Assembly

Genomic

  1. NC_056660.1 Reference P.tigris_Pti1_mat1.1 Primary Assembly

    Range
    91839690..91849443 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042982434.1 → XP_042838368.1  beta-1,4-galactosyltransferase 7 isoform X3

    UniProtKB/TrEMBL
    A0A8C9KMA9
    Conserved Domains (1) summary
    cd00899
    Location:92 → 315
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids

  2. XM_042982422.1 → XP_042838356.1  beta-1,4-galactosyltransferase 7 isoform X1

    Conserved Domains (1) summary
    cd00899
    Location:146 → 369
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids

  3. XM_042982425.1 → XP_042838359.1  beta-1,4-galactosyltransferase 7 isoform X2

    UniProtKB/TrEMBL
    A0A8C9KMA9
    Conserved Domains (1) summary
    cd00899
    Location:113 → 336
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids
Nucleotide Protein
Heading Accession and Version

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