U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

CHST4 carbohydrate sulfotransferase 4 [ Panthera tigris (tiger) ]

Gene ID: 102948668, updated on 15-Nov-2024

Summary

Go to the top of the page Help
Gene symbol
CHST4
Gene description
carbohydrate sulfotransferase 4
See related
Ensembl:ENSPTIG00000001748
Gene type
protein coding
RefSeq status
MODEL
Organism
Panthera tigris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Pantherinae; Panthera
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See CHST4 in Genome Data Viewer
Location:
chromosome: E2
Exon count:
4
Annotation release Status Assembly Chr Location
102 current P.tigris_Pti1_mat1.1 (GCF_018350195.1) E2 NC_056674.1 (47433279..47445136, complement)
101 previous assembly PanTig1.0 (GCF_000464555.1) Unplaced Scaffold NW_006711606.1 (1206672..1218591)

Chromosome E2 - NC_056674.1Genomic Context describing neighboring genes Neighboring gene PH domain and leucine rich repeat protein phosphatase 2 Neighboring gene MARVEL domain containing 3 Neighboring gene tyrosine aminotransferase Neighboring gene ragulator complex protein LAMTOR5-like Neighboring gene zinc finger protein 19-like Neighboring gene zinc finger protein 19

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables N-acetylglucosamine 6-O-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-acetylglucosamine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein sulfation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
carbohydrate sulfotransferase 4

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Panthera tigris Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P.tigris_Pti1_mat1.1 Primary Assembly

Genomic

  1. NC_056674.1 Reference P.tigris_Pti1_mat1.1 Primary Assembly

    Range
    47433279..47445136 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015542862.2 → XP_015398348.1  carbohydrate sulfotransferase 4 isoform X2

    UniProtKB/TrEMBL
    A0A8C9M149
    Conserved Domains (1) summary
    cl21551
    Location:182 → 358
    Sulfotransfer_3; Sulfotransferase family

  2. XM_007099348.3 → XP_007099410.2  carbohydrate sulfotransferase 4 isoform X2

    UniProtKB/TrEMBL
    A0A8C9M149
    Related
    ENSPTIP00000000658.1
    Conserved Domains (1) summary
    cl21551
    Location:182 → 358
    Sulfotransfer_3; Sulfotransferase family

  3. XM_042970078.1 → XP_042826012.1  carbohydrate sulfotransferase 4 isoform X1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.