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SLC27A5 solute carrier family 27 member 5 [ Panthera tigris (tiger) ]

Gene ID: 102948587, updated on 15-Nov-2024

Summary

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Gene symbol
SLC27A5
Gene description
solute carrier family 27 member 5
See related
Ensembl:ENSPTIG00000020067
Gene type
protein coding
RefSeq status
MODEL
Organism
Panthera tigris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Pantherinae; Panthera
Orthologs
human mouse all
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Genomic context

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See SLC27A5 in Genome Data Viewer
Location:
chromosome: E2
Exon count:
10
Annotation release Status Assembly Chr Location
102 current P.tigris_Pti1_mat1.1 (GCF_018350195.1) E2 NC_056674.1 (105692..112618)
101 previous assembly PanTig1.0 (GCF_000464555.1) Unplaced Scaffold NW_006712154.1 (585971..592978, complement)

Chromosome E2 - NC_056674.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC122234219 Neighboring gene zinc finger and BTB domain containing 45 Neighboring gene zinc finger protein 324A-like Neighboring gene zinc finger protein 446

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables fatty acid transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables long-chain fatty acid transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables long-chain fatty acid-CoA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in bile acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ketone body biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in long-chain fatty acid import across plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in triglyceride mobilization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in very long-chain fatty acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
bile acyl-CoA synthetase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Panthera tigris Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P.tigris_Pti1_mat1.1 Primary Assembly

Genomic

  1. NC_056674.1 Reference P.tigris_Pti1_mat1.1 Primary Assembly

    Range
    105692..112618
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007093531.3 → XP_007093593.1  bile acyl-CoA synthetase

    UniProtKB/TrEMBL
    A0A8C9KL93
    Related
    ENSPTIP00000023692.1
    Conserved Domains (2) summary
    PRK08279
    Location:69 → 687
    PRK08279; long-chain-acyl-CoA synthetase; Validated
    cl17068
    Location:137 → 677
    AFD_class_I; Adenylate forming domain, Class I superfamily
Nucleotide Protein
Heading Accession and Version

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