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SLC35C1 solute carrier family 35 member C1 [ Chelonia mydas (Green sea turtle) ]

Gene ID: 102948126, updated on 10-Mar-2024

Summary

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Gene symbol
SLC35C1
Gene description
solute carrier family 35 member C1
Locus tag
UY3_07982
See related
EnsemblRapid:ENSCMYG00015014628
Gene type
protein coding
RefSeq status
MODEL
Organism
Chelonia mydas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Cheloniidae; Chelonia
Orthologs
human mouse all
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Genomic context

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See SLC35C1 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
3
Annotation release Status Assembly Chr Location
103 current rCheMyd1.pri.v2 (GCF_015237465.2) 6 NC_051246.2 (60142747..60147150)
102 previous assembly rCheMyd1.pri (GCF_015237465.1) 5 NC_051245.1 (60142773..60147150)

Chromosome 6 - NC_051246.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC122466437 Neighboring gene uncharacterized LOC122466438 Neighboring gene uncharacterized LOC122466439 Neighboring gene cryptochrome circadian regulator 2 Neighboring gene mitogen-activated protein kinase 8 interacting protein 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables antiporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GDP-fucose import into Golgi lumen IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein O-linked fucosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GDP-fucose transporter 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chelonia mydas Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rCheMyd1.pri.v2 Primary Assembly

Genomic

  1. NC_051246.2 Reference rCheMyd1.pri.v2 Primary Assembly

    Range
    60142747..60147150
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027823150.3 → XP_027678951.2  GDP-fucose transporter 1 isoform X2

    UniProtKB/TrEMBL
    M7BS80
    Related
    ENSCMYP00015022569.1, ENSCMYT00015027500.1
    Conserved Domains (1) summary
    cl26744
    Location:31 → 295
    TPT; Triose-phosphate Transporter family

  2. XM_007060729.4 → XP_007060791.2  GDP-fucose transporter 1 isoform X1

    UniProtKB/TrEMBL
    M7BS80
    Related
    ENSCMYP00015022563.1, ENSCMYT00015027494.1
    Conserved Domains (1) summary
    cl26744
    Location:44 → 308
    TPT; Triose-phosphate Transporter family
Nucleotide Protein
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