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GLT8D1 glycosyltransferase 8 domain containing 1 [ Chelonia mydas (Green sea turtle) ]

Gene ID: 102947733, updated on 10-Mar-2024

Summary

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Gene symbol
GLT8D1
Gene description
glycosyltransferase 8 domain containing 1
See related
EnsemblRapid:ENSCMYG00015010663
Gene type
protein coding
RefSeq status
MODEL
Organism
Chelonia mydas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Cheloniidae; Chelonia
Orthologs
human mouse all
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Genomic context

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See GLT8D1 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
14
Annotation release Status Assembly Chr Location
103 current rCheMyd1.pri.v2 (GCF_015237465.2) 7 NC_057853.1 (42354775..42398940)
102 previous assembly rCheMyd1.pri (GCF_015237465.1) 7 NC_051247.1 (42371744..42398945)

Chromosome 7 - NC_057853.1Genomic Context describing neighboring genes Neighboring gene inter-alpha-trypsin inhibitor heavy chain H3 Neighboring gene NIMA related kinase 4 Neighboring gene signal peptidase complex subunit 1 Neighboring gene small nucleolar RNA SNORD19 Neighboring gene small nucleolar RNA SNORD69 Neighboring gene G protein nucleolar 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sea turtle fibropapilloma tumors share genomic drivers and therapeutic vulnerabilities with human cancers. Duffy DJ, et al. Commun Biol, 2018. PMID 30271945, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycosyltransferase 8 domain-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chelonia mydas Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rCheMyd1.pri.v2 Primary Assembly

Genomic

  1. NC_057853.1 Reference rCheMyd1.pri.v2 Primary Assembly

    Range
    42354775..42398940
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_043552231.1 → XP_043408166.1  glycosyltransferase 8 domain-containing protein 1

    Conserved Domains (1) summary
    cd06429
    Location:67 → 352
    GT8_like_1; GT8_like_1 represents a subfamily of GT8 with unknown function

  2. XM_037905618.2 → XP_037761546.1  glycosyltransferase 8 domain-containing protein 1

    Related
    ENSCMYP00015016508.1, ENSCMYT00015020040.1
    Conserved Domains (1) summary
    cd06429
    Location:67 → 352
    GT8_like_1; GT8_like_1 represents a subfamily of GT8 with unknown function

  3. XM_027817962.3 → XP_027673763.2  glycosyltransferase 8 domain-containing protein 1

    Conserved Domains (1) summary
    cd06429
    Location:67 → 352
    GT8_like_1; GT8_like_1 represents a subfamily of GT8 with unknown function

  4. XM_007055601.4 → XP_007055663.2  glycosyltransferase 8 domain-containing protein 1

    Related
    ENSCMYP00015016500.1, ENSCMYT00015020032.1
    Conserved Domains (1) summary
    cd06429
    Location:67 → 352
    GT8_like_1; GT8_like_1 represents a subfamily of GT8 with unknown function
Nucleotide Protein
Heading Accession and Version

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