U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

POMK protein O-mannose kinase [ Chelonia mydas (Green sea turtle) ]

Gene ID: 102947718, updated on 10-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
POMK
Gene description
protein O-mannose kinase
Locus tag
UY3_17726
See related
EnsemblRapid:ENSCMYG00015012767
Gene type
protein coding
RefSeq status
MODEL
Organism
Chelonia mydas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Cheloniidae; Chelonia
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See POMK in Genome Data Viewer
Location:
chromosome: 4
Exon count:
4
Annotation release Status Assembly Chr Location
103 current rCheMyd1.pri.v2 (GCF_015237465.2) 4 NC_057852.1 (11003039..11011598, complement)
102 previous assembly rCheMyd1.pri (GCF_015237465.1) 4 NC_051244.1 (11003039..11011598, complement)

Chromosome 4 - NC_057852.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 20 member 2 Neighboring gene small integral membrane protein 19 Neighboring gene uncharacterized LOC122465351 Neighboring gene heparan-alpha-glucosaminide N-acetyltransferase Neighboring gene integrator complex subunit 10 Neighboring gene chondroitin sulfate N-acetylgalactosaminyltransferase 1

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables carbohydrate kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein O-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
protein O-mannose kinase

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Chelonia mydas Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rCheMyd1.pri.v2 Primary Assembly

Genomic

  1. NC_057852.1 Reference rCheMyd1.pri.v2 Primary Assembly

    Range
    11003039..11011598 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037896621.1 → XP_037752549.1  protein O-mannose kinase isoform X2

    UniProtKB/TrEMBL
    M7BAF8
    Conserved Domains (1) summary
    cl21453
    Location:90 → 322
    PKc_like; Protein Kinases, catalytic domain

  2. XM_007070987.4 → XP_007071049.2  protein O-mannose kinase isoform X2

    UniProtKB/TrEMBL
    M7BAF8
    Conserved Domains (1) summary
    cl21453
    Location:90 → 322
    PKc_like; Protein Kinases, catalytic domain

  3. XM_027833146.3 → XP_027688947.2  protein O-mannose kinase isoform X1

    UniProtKB/TrEMBL
    M7BAF8
    Related
    ENSCMYP00015019783.1, ENSCMYT00015023969.1
    Conserved Domains (1) summary
    cl21453
    Location:99 → 331
    PKc_like; Protein Kinases, catalytic domain

  4. XM_043544436.1 → XP_043400371.1  protein O-mannose kinase isoform X2

    UniProtKB/TrEMBL
    M7BAF8
    Conserved Domains (1) summary
    cl21453
    Location:90 → 322
    PKc_like; Protein Kinases, catalytic domain

  5. XM_043544437.1 → XP_043400372.1  protein O-mannose kinase isoform X2

    UniProtKB/TrEMBL
    M7BAF8
    Conserved Domains (1) summary
    cl21453
    Location:90 → 322
    PKc_like; Protein Kinases, catalytic domain

  6. XM_043544438.1 → XP_043400373.1  protein O-mannose kinase isoform X2

    UniProtKB/TrEMBL
    M7BAF8
    Conserved Domains (1) summary
    cl21453
    Location:90 → 322
    PKc_like; Protein Kinases, catalytic domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.