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LOC102947310 torsin-1A-interacting protein 2 [ Chelonia mydas (Green sea turtle) ]

Gene ID: 102947310, updated on 6-Feb-2024

Summary

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Gene symbol
LOC102947310
Gene description
torsin-1A-interacting protein 2
Locus tag
UY3_08317
See related
EnsemblRapid:ENSCMYG00015012676
Gene type
protein coding
RefSeq status
MODEL
Organism
Chelonia mydas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Cheloniidae; Chelonia
Also known as
TOR1AIP2
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Genomic context

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See LOC102947310 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
6
Annotation release Status Assembly Chr Location
103 current rCheMyd1.pri.v2 (GCF_015237465.2) 8 NC_057854.1 (51428497..51446559, complement)
102 previous assembly rCheMyd1.pri (GCF_015237465.1) 8 NC_051248.1 (51431427..51446552, complement)

Chromosome 8 - NC_057854.1Genomic Context describing neighboring genes Neighboring gene family with sequence similarity 163 member A Neighboring gene ADAMTS-like protein 2 Neighboring gene uncharacterized LOC122461461 Neighboring gene torsin-1A-interacting protein 1 Neighboring gene centrosomal protein 350

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sea turtle fibropapilloma tumors share genomic drivers and therapeutic vulnerabilities with human cancers. Duffy DJ, et al. Commun Biol, 2018. PMID 30271945, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in membrane organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
torsin-1A-interacting protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chelonia mydas Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rCheMyd1.pri.v2 Primary Assembly

Genomic

  1. NC_057854.1 Reference rCheMyd1.pri.v2 Primary Assembly

    Range
    51428497..51446559 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_043521162.1 → XP_043377097.1  torsin-1A-interacting protein 2

    Related
    ENSCMYP00015019664.1, ENSCMYT00015023811.1
    Conserved Domains (1) summary
    pfam05609
    Location:38 → 478
    LAP1C; Lamina-associated polypeptide 1C (LAP1C)

  2. XM_037906872.2 → XP_037762800.1  torsin-1A-interacting protein 2

    Conserved Domains (1) summary
    pfam05609
    Location:38 → 478
    LAP1C; Lamina-associated polypeptide 1C (LAP1C)

RNA

  1. XR_005226514.2 RNA Sequence

  2. XR_005226513.2 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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