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B4GALT4 beta-1,4-galactosyltransferase 4 [ Chelonia mydas (Green sea turtle) ]

Gene ID: 102946330, updated on 10-Mar-2024

Summary

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Gene symbol
B4GALT4
Gene description
beta-1,4-galactosyltransferase 4
Locus tag
UY3_09193
See related
EnsemblRapid:ENSCMYG00015016347
Gene type
protein coding
RefSeq status
MODEL
Organism
Chelonia mydas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Cheloniidae; Chelonia
Orthologs
human mouse all
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Genomic context

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See B4GALT4 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
11
Annotation release Status Assembly Chr Location
103 current rCheMyd1.pri.v2 (GCF_015237465.2) 1 NC_057849.1 (200339643..200406916, complement)
102 previous assembly rCheMyd1.pri (GCF_015237465.1) 1 NC_051241.1 (200339168..200406778, complement)

Chromosome 1 - NC_057849.1Genomic Context describing neighboring genes Neighboring gene galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1 Neighboring gene beta-1,4-galactosyltransferase 3 Neighboring gene transmembrane protein 39A Neighboring gene fatty acid amide hydrolase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,4-galactosyltransferase 4
Names
UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chelonia mydas Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rCheMyd1.pri.v2 Primary Assembly

Genomic

  1. NC_057849.1 Reference rCheMyd1.pri.v2 Primary Assembly

    Range
    200339643..200406916 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037909251.2 → XP_037765179.1  beta-1,4-galactosyltransferase 4

    UniProtKB/TrEMBL
    M7B6Q8
    Conserved Domains (1) summary
    cd00899
    Location:129 → 346
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids

  2. XM_043538703.1 → XP_043394638.1  beta-1,4-galactosyltransferase 4

    UniProtKB/TrEMBL
    M7B6Q8
    Conserved Domains (1) summary
    cd00899
    Location:129 → 346
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids

  3. XM_043538704.1 → XP_043394639.1  beta-1,4-galactosyltransferase 4

    UniProtKB/TrEMBL
    M7B6Q8
    Conserved Domains (1) summary
    cd00899
    Location:129 → 346
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids

  4. XM_043538701.1 → XP_043394636.1  beta-1,4-galactosyltransferase 4

    UniProtKB/TrEMBL
    M7B6Q8
    Conserved Domains (1) summary
    cd00899
    Location:129 → 346
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids

  5. XM_043538705.1 → XP_043394640.1  beta-1,4-galactosyltransferase 4

    UniProtKB/TrEMBL
    M7B6Q8
    Conserved Domains (1) summary
    cd00899
    Location:129 → 346
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids

  6. XM_043538702.1 → XP_043394637.1  beta-1,4-galactosyltransferase 4

    UniProtKB/TrEMBL
    M7B6Q8
    Related
    ENSCMYP00015025021.1, ENSCMYT00015030742.1
    Conserved Domains (1) summary
    cd00899
    Location:129 → 346
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids
Nucleotide Protein
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