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ACSL3 acyl-CoA synthetase long chain family member 3 [ Chelonia mydas (Green sea turtle) ]

Gene ID: 102945945, updated on 10-Mar-2024

Summary

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Gene symbol
ACSL3
Gene description
acyl-CoA synthetase long chain family member 3
Locus tag
UY3_05520
See related
EnsemblRapid:ENSCMYG00015020559
Gene type
protein coding
RefSeq status
MODEL
Organism
Chelonia mydas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Cheloniidae; Chelonia
Orthologs
human mouse all
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Genomic context

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See ACSL3 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
21
Annotation release Status Assembly Chr Location
103 current rCheMyd1.pri.v2 (GCF_015237465.2) 9 NC_057855.1 (36685538..36796357, complement)
102 previous assembly rCheMyd1.pri (GCF_015237465.1) 9 NC_051249.1 (36685538..36796344, complement)

Chromosome 9 - NC_057855.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC122461841 Neighboring gene potassium voltage-gated channel subfamily E regulatory subunit 4 Neighboring gene uncharacterized LOC119567144 Neighboring gene uncharacterized LOC122461584 Neighboring gene monoacylglycerol O-acyltransferase 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables long-chain fatty acid-CoA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in long-chain fatty acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in long-chain fatty-acyl-CoA metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neuron differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in lipid droplet IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
long-chain-fatty-acid--CoA ligase 3
Names
Long-chain-fatty-acid--CoA ligase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chelonia mydas Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rCheMyd1.pri.v2 Primary Assembly

Genomic

  1. NC_057855.1 Reference rCheMyd1.pri.v2 Primary Assembly

    Range
    36685538..36796357 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_043521768.1 → XP_043377703.1  long-chain-fatty-acid--CoA ligase 3 isoform X7

    Conserved Domains (1) summary
    cl17068
    Location:32 → 708
    AFD_class_I; Adenylate forming domain, Class I superfamily

  2. XM_043521766.1 → XP_043377701.1  long-chain-fatty-acid--CoA ligase 3 isoform X6

    Related
    ENSCMYP00015031324.1, ENSCMYT00015038651.1
    Conserved Domains (1) summary
    cl17068
    Location:32 → 712
    AFD_class_I; Adenylate forming domain, Class I superfamily

  3. XM_043521762.1 → XP_043377697.1  long-chain-fatty-acid--CoA ligase 3 isoform X3

    Conserved Domains (1) summary
    cl17068
    Location:84 → 760
    AFD_class_I; Adenylate forming domain, Class I superfamily

  4. XM_043521761.1 → XP_043377696.1  long-chain-fatty-acid--CoA ligase 3 isoform X2

    Conserved Domains (1) summary
    cl17068
    Location:84 → 764
    AFD_class_I; Adenylate forming domain, Class I superfamily

  5. XM_043521769.1 → XP_043377704.1  long-chain-fatty-acid--CoA ligase 3 isoform X7

    Related
    ENSCMYP00015031313.1, ENSCMYT00015038637.1
    Conserved Domains (1) summary
    cl17068
    Location:32 → 708
    AFD_class_I; Adenylate forming domain, Class I superfamily

  6. XM_037909768.2 → XP_037765696.1  long-chain-fatty-acid--CoA ligase 3 isoform X5

    Conserved Domains (1) summary
    cl17068
    Location:32 → 605
    AFD_class_I; Adenylate forming domain, Class I superfamily

  7. XM_037909767.2 → XP_037765695.1  long-chain-fatty-acid--CoA ligase 3 isoform X5

    Conserved Domains (1) summary
    cl17068
    Location:32 → 605
    AFD_class_I; Adenylate forming domain, Class I superfamily

  8. XM_037909765.2 → XP_037765693.1  long-chain-fatty-acid--CoA ligase 3 isoform X5

    Conserved Domains (1) summary
    cl17068
    Location:32 → 605
    AFD_class_I; Adenylate forming domain, Class I superfamily

  9. XM_043521764.1 → XP_043377699.1  long-chain-fatty-acid--CoA ligase 3 isoform X5

    Conserved Domains (1) summary
    cl17068
    Location:32 → 605
    AFD_class_I; Adenylate forming domain, Class I superfamily

  10. XM_043521763.1 → XP_043377698.1  long-chain-fatty-acid--CoA ligase 3 isoform X4

    Conserved Domains (1) summary
    cl17068
    Location:84 → 657
    AFD_class_I; Adenylate forming domain, Class I superfamily

  11. XM_043521759.1 → XP_043377694.1  long-chain-fatty-acid--CoA ligase 3 isoform X1

    Conserved Domains (1) summary
    cl17068
    Location:84 → 657
    AFD_class_I; Adenylate forming domain, Class I superfamily

  12. XM_043521765.1 → XP_043377700.1  long-chain-fatty-acid--CoA ligase 3 isoform X5

    Conserved Domains (1) summary
    cl17068
    Location:32 → 605
    AFD_class_I; Adenylate forming domain, Class I superfamily

RNA

  1. XR_006283556.1 RNA Sequence

  2. XR_006283555.1 RNA Sequence

Nucleotide Protein
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