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ITPKB inositol-trisphosphate 3-kinase B [ Chelonia mydas (Green sea turtle) ]

Gene ID: 102945685, updated on 10-Mar-2024

Summary

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Gene symbol
ITPKB
Gene description
inositol-trisphosphate 3-kinase B
Locus tag
UY3_18465
See related
EnsemblRapid:ENSCMYG00015001971
Gene type
protein coding
RefSeq status
MODEL
Organism
Chelonia mydas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Cheloniidae; Chelonia
Orthologs
human mouse all
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Genomic context

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See ITPKB in Genome Data Viewer
Location:
chromosome: 3
Exon count:
8
Annotation release Status Assembly Chr Location
103 current rCheMyd1.pri.v2 (GCF_015237465.2) 3 NC_057851.1 (152524784..152633325)
102 previous assembly rCheMyd1.pri (GCF_015237465.1) 3 NC_051243.1 (152524790..152633325)

Chromosome 3 - NC_057851.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC119565833 Neighboring gene coenzyme Q8A Neighboring gene presenilin 2 Neighboring gene uncharacterized LOC122465167 Neighboring gene stum, mechanosensory transduction mediator homolog Neighboring gene uncharacterized LOC122465166

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables inositol tetrakisphosphate kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables inositol-1,4,5-trisphosphate 3-kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in inositol phosphate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
inositol-trisphosphate 3-kinase B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chelonia mydas Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rCheMyd1.pri.v2 Primary Assembly

Genomic

  1. NC_057851.1 Reference rCheMyd1.pri.v2 Primary Assembly

    Range
    152524784..152633325
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007071758.4 → XP_007071820.2  inositol-trisphosphate 3-kinase B isoform X1

    Related
    ENSCMYP00015002988.1, ENSCMYT00015003632.1
    Conserved Domains (2) summary
    TIGR00927
    Location:194 → 467
    2A1904; K+-dependent Na+/Ca+ exchanger
    pfam03770
    Location:696 → 906
    IPK; Inositol polyphosphate kinase

  2. XM_043543557.1 → XP_043399492.1  inositol-trisphosphate 3-kinase B isoform X2

    Conserved Domains (2) summary
    pfam03157
    Location:195 → 452
    Glutenin_hmw; High molecular weight glutenin subunit
    cl12283
    Location:661 → 899
    IPK; Inositol polyphosphate kinase
Nucleotide Protein
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