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ZBTB6 zinc finger and BTB domain containing 6 [ Chelonia mydas (Green sea turtle) ]

Gene ID: 102944833, updated on 10-Mar-2024

Summary

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Gene symbol
ZBTB6
Gene description
zinc finger and BTB domain containing 6
Locus tag
UY3_08172
See related
EnsemblRapid:ENSCMYG00015007942
Gene type
protein coding
RefSeq status
MODEL
Organism
Chelonia mydas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Cheloniidae; Chelonia
Orthologs
human mouse all
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Genomic context

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See ZBTB6 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
3
Annotation release Status Assembly Chr Location
103 current rCheMyd1.pri.v2 (GCF_015237465.2) 16 NC_057857.1 (21615241..21620174, complement)
102 previous assembly rCheMyd1.pri (GCF_015237465.1) 16 NC_051256.1 (21615241..21620145, complement)

Chromosome 16 - NC_057857.1Genomic Context describing neighboring genes Neighboring gene ring finger and CCCH-type domains 2 Neighboring gene small nucleolar RNA SNORD90 Neighboring gene uncharacterized LOC122463158 Neighboring gene zinc finger and BTB domain containing 26 Neighboring gene RAB GTPase activating protein 1 Neighboring gene G protein-coupled receptor 21

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger and BTB domain-containing protein 6
Names
Zinc finger and BTB domain-containing protein 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chelonia mydas Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rCheMyd1.pri.v2 Primary Assembly

Genomic

  1. NC_057857.1 Reference rCheMyd1.pri.v2 Primary Assembly

    Range
    21615241..21620174 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037879891.2 → XP_037735819.1  zinc finger and BTB domain-containing protein 6

    Related
    ENSCMYP00015012237.1, ENSCMYT00015014876.1
    Conserved Domains (5) summary
    sd00017
    Location:329 → 349
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cd18197
    Location:8 → 123
    BTB_POZ_ZBTB6; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger and BTB domain-containing protein 6 (ZBTB6)
    pfam00096
    Location:327 → 349
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:341 → 365
    zf-H2C2_2; Zinc-finger double domain
    pfam15909
    Location:332 → 402
    zf-C2H2_8; C2H2-type zinc ribbon

  2. XM_043530763.1 → XP_043386698.1  zinc finger and BTB domain-containing protein 6

    Related
    ENSCMYP00015012251.1, ENSCMYT00015014897.1
    Conserved Domains (5) summary
    sd00017
    Location:329 → 349
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cd18197
    Location:8 → 123
    BTB_POZ_ZBTB6; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger and BTB domain-containing protein 6 (ZBTB6)
    pfam00096
    Location:327 → 349
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:341 → 365
    zf-H2C2_2; Zinc-finger double domain
    pfam15909
    Location:332 → 402
    zf-C2H2_8; C2H2-type zinc ribbon

  3. XM_043530762.1 → XP_043386697.1  zinc finger and BTB domain-containing protein 6

    Related
    ENSCMYP00015012236.1, ENSCMYT00015014869.1
    Conserved Domains (5) summary
    sd00017
    Location:329 → 349
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cd18197
    Location:8 → 123
    BTB_POZ_ZBTB6; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger and BTB domain-containing protein 6 (ZBTB6)
    pfam00096
    Location:327 → 349
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:341 → 365
    zf-H2C2_2; Zinc-finger double domain
    pfam15909
    Location:332 → 402
    zf-C2H2_8; C2H2-type zinc ribbon
Nucleotide Protein
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