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PI4K2B phosphatidylinositol 4-kinase type 2 beta [ Chelonia mydas (Green sea turtle) ]

Gene ID: 102944599, updated on 10-Mar-2024

Summary

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Gene symbol
PI4K2B
Gene description
phosphatidylinositol 4-kinase type 2 beta
Locus tag
UY3_05430
See related
EnsemblRapid:ENSCMYG00015010367
Gene type
protein coding
RefSeq status
MODEL
Organism
Chelonia mydas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Cheloniidae; Chelonia
Orthologs
human mouse all
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Genomic context

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See PI4K2B in Genome Data Viewer
Location:
chromosome: 4
Exon count:
12
Annotation release Status Assembly Chr Location
103 current rCheMyd1.pri.v2 (GCF_015237465.2) 4 NC_057852.1 (106308201..106344024, complement)
102 previous assembly rCheMyd1.pri (GCF_015237465.1) 4 NC_051244.1 (106308201..106343816, complement)

Chromosome 4 - NC_057852.1Genomic Context describing neighboring genes Neighboring gene transfer RNA glutamic acid (anticodon UUC) Neighboring gene zinc finger CCHC-type containing 4 Neighboring gene Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase Neighboring gene uncharacterized LOC119566139

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 1-phosphatidylinositol 4-kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Golgi organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endosome organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phosphatidylinositol phosphate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in lysosomal membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in trans-Golgi network IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphatidylinositol 4-kinase type 2-beta
Names
Phosphatidylinositol 4-kinase type 2-beta

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chelonia mydas Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rCheMyd1.pri.v2 Primary Assembly

Genomic

  1. NC_057852.1 Reference rCheMyd1.pri.v2 Primary Assembly

    Range
    106308201..106344024 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007058101.4 → XP_007058163.2  phosphatidylinositol 4-kinase type 2-beta isoform X2

    Related
    ENSCMYP00015016018.1, ENSCMYT00015019423.1
    Conserved Domains (1) summary
    pfam00454
    Location:134 → 432
    PI3_PI4_kinase; Phosphatidylinositol 3- and 4-kinase

  2. XM_043544568.1 → XP_043400503.1  phosphatidylinositol 4-kinase type 2-beta isoform X1

  3. XM_043544569.1 → XP_043400504.1  phosphatidylinositol 4-kinase type 2-beta isoform X3

Nucleotide Protein
Heading Accession and Version

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