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PIGG phosphatidylinositol glycan anchor biosynthesis class G (EMM blood group) [ Chelonia mydas (Green sea turtle) ]

Gene ID: 102944125, updated on 10-Mar-2024

Summary

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Gene symbol
PIGG
Gene description
phosphatidylinositol glycan anchor biosynthesis class G (EMM blood group)
Locus tag
UY3_00198
See related
EnsemblRapid:ENSCMYG00015015240
Gene type
protein coding
RefSeq status
MODEL
Organism
Chelonia mydas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Cheloniidae; Chelonia
Orthologs
human mouse all
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Genomic context

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See PIGG in Genome Data Viewer
Location:
chromosome: 5
Exon count:
18
Annotation release Status Assembly Chr Location
103 current rCheMyd1.pri.v2 (GCF_015237465.2) 5 NC_051245.2 (126193875..126348346)
102 previous assembly rCheMyd1.pri (GCF_015237465.1) 6 NC_051246.1 (126193994..126348346)

Chromosome 5 - NC_051245.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114021041 Neighboring gene cyclin G associated kinase Neighboring gene uncharacterized LOC122465805 Neighboring gene uncharacterized LOC119566602

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables CP2 mannose-ethanolamine phosphotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GPI anchor biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GPI ethanolamine phosphate transferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chelonia mydas Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rCheMyd1.pri.v2 Primary Assembly

Genomic

  1. NC_051245.2 Reference rCheMyd1.pri.v2 Primary Assembly

    Range
    126193875..126348346
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037902271.2 → XP_037758199.1  GPI ethanolamine phosphate transferase 2 isoform X4

    Related
    ENSCMYP00015023385.1, ENSCMYT00015028646.1
    Conserved Domains (1) summary
    cd16024
    Location:64 → 337
    GPI_EPT_2; GPI ethanolamine phosphate transferase 2; PIG-G

  2. XM_043546516.1 → XP_043402451.1  GPI ethanolamine phosphate transferase 2 isoform X1

    Conserved Domains (1) summary
    cd16024
    Location:64 → 337
    GPI_EPT_2; GPI ethanolamine phosphate transferase 2; PIG-G

  3. XM_037902278.2 → XP_037758206.1  GPI ethanolamine phosphate transferase 2 isoform X10

    Conserved Domains (1) summary
    cd16024
    Location:64 → 337
    GPI_EPT_2; GPI ethanolamine phosphate transferase 2; PIG-G

  4. XM_037902275.2 → XP_037758203.1  GPI ethanolamine phosphate transferase 2 isoform X7

    Conserved Domains (1) summary
    cd16024
    Location:64 → 313
    GPI_EPT_2; GPI ethanolamine phosphate transferase 2; PIG-G

  5. XM_037902274.2 → XP_037758202.1  GPI ethanolamine phosphate transferase 2 isoform X6

    Related
    ENSCMYP00015023390.1, ENSCMYT00015028651.1
    Conserved Domains (1) summary
    cl23718
    Location:64 → 267
    ALP_like; alkaline phosphatases and sulfatases

  6. XM_043546517.1 → XP_043402452.1  GPI ethanolamine phosphate transferase 2 isoform X2

    Conserved Domains (1) summary
    cd16024
    Location:64 → 337
    GPI_EPT_2; GPI ethanolamine phosphate transferase 2; PIG-G

  7. XM_043546522.1 → XP_043402457.1  GPI ethanolamine phosphate transferase 2 isoform X12

    Conserved Domains (1) summary
    cd16024
    Location:64 → 337
    GPI_EPT_2; GPI ethanolamine phosphate transferase 2; PIG-G

  8. XM_043546520.1 → XP_043402455.1  GPI ethanolamine phosphate transferase 2 isoform X9

    Conserved Domains (1) summary
    cd16024
    Location:64 → 313
    GPI_EPT_2; GPI ethanolamine phosphate transferase 2; PIG-G

  9. XM_037902270.2 → XP_037758198.1  GPI ethanolamine phosphate transferase 2 isoform X3

    Related
    ENSCMYP00015023397.1, ENSCMYT00015028658.1
    Conserved Domains (1) summary
    cd16024
    Location:64 → 337
    GPI_EPT_2; GPI ethanolamine phosphate transferase 2; PIG-G

  10. XM_037902272.2 → XP_037758200.1  GPI ethanolamine phosphate transferase 2 isoform X5

    UniProtKB/TrEMBL
    M7BZ76
    Related
    ENSCMYP00015023379.1, ENSCMYT00015028641.1
    Conserved Domains (1) summary
    cd16024
    Location:64 → 337
    GPI_EPT_2; GPI ethanolamine phosphate transferase 2; PIG-G

  11. XM_043546519.1 → XP_043402454.1  GPI ethanolamine phosphate transferase 2 isoform X8

    UniProtKB/TrEMBL
    M7BZ76
    Conserved Domains (1) summary
    cd16024
    Location:64 → 337
    GPI_EPT_2; GPI ethanolamine phosphate transferase 2; PIG-G

  12. XM_043546521.1 → XP_043402456.1  GPI ethanolamine phosphate transferase 2 isoform X11

    Conserved Domains (1) summary
    cd16024
    Location:64 → 337
    GPI_EPT_2; GPI ethanolamine phosphate transferase 2; PIG-G

RNA

  1. XR_005225869.2 RNA Sequence

  2. XR_005225868.2 RNA Sequence

Nucleotide Protein
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