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MMADHC metabolism of cobalamin associated D [ Chelonia mydas (Green sea turtle) ]

Gene ID: 102943939, updated on 10-Mar-2024

Summary

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Gene symbol
MMADHC
Gene description
metabolism of cobalamin associated D
Locus tag
UY3_08896
See related
EnsemblRapid:ENSCMYG00015004896
Gene type
protein coding
RefSeq status
MODEL
Organism
Chelonia mydas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Cheloniidae; Chelonia
Orthologs
human mouse all
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Genomic context

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See MMADHC in Genome Data Viewer
Location:
chromosome: 11
Exon count:
9
Annotation release Status Assembly Chr Location
103 current rCheMyd1.pri.v2 (GCF_015237465.2) 11 NC_051251.2 (26532122..26553604, complement)
102 previous assembly rCheMyd1.pri (GCF_015237465.1) 11 NC_051251.1 (52968686..52987602)

Chromosome 11 - NC_051251.2Genomic Context describing neighboring genes Neighboring gene zinc finger MYM-type protein 1-like Neighboring gene LY6/PLAUR domain containing 6 Neighboring gene transfer RNA glutamic acid (anticodon CUC) Neighboring gene transfer RNA glutamic acid (anticodon CUC)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sea turtle fibropapilloma tumors share genomic drivers and therapeutic vulnerabilities with human cancers. Duffy DJ, et al. Commun Biol, 2018. PMID 30271945, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cobalamin metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cobalamin trafficking protein CblD
Names
Methylmalonic aciduria and homocystinuria type D like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chelonia mydas Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rCheMyd1.pri.v2 Primary Assembly

Genomic

  1. NC_051251.2 Reference rCheMyd1.pri.v2 Primary Assembly

    Range
    26532122..26553604 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_043525087.1 → XP_043381022.1  cobalamin trafficking protein CblD isoform X1

    UniProtKB/TrEMBL
    M7BEE5
    Conserved Domains (1) summary
    pfam10229
    Location:24 → 293
    MMADHC; Methylmalonic aciduria and homocystinuria type D protein

  2. XM_043525088.1 → XP_043381023.1  cobalamin trafficking protein CblD isoform X2

    UniProtKB/TrEMBL
    M7BEE5

  3. XM_037912081.2 → XP_037768009.1  cobalamin trafficking protein CblD isoform X1

    UniProtKB/TrEMBL
    M7BEE5
    Conserved Domains (1) summary
    pfam10229
    Location:24 → 293
    MMADHC; Methylmalonic aciduria and homocystinuria type D protein

  4. XM_037912082.2 → XP_037768010.1  cobalamin trafficking protein CblD isoform X1

    UniProtKB/TrEMBL
    M7BEE5
    Related
    ENSCMYP00015007552.1, ENSCMYT00015009142.1
    Conserved Domains (1) summary
    pfam10229
    Location:24 → 293
    MMADHC; Methylmalonic aciduria and homocystinuria type D protein
Nucleotide Protein
Heading Accession and Version

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