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PTP4A3 protein tyrosine phosphatase 4A3 [ Chelonia mydas (Green sea turtle) ]

Gene ID: 102943868, updated on 10-Mar-2024

Summary

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Gene symbol
PTP4A3
Gene description
protein tyrosine phosphatase 4A3
Locus tag
UY3_10304
See related
EnsemblRapid:ENSCMYG00015004968
Gene type
protein coding
RefSeq status
MODEL
Organism
Chelonia mydas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Cheloniidae; Chelonia
Orthologs
human mouse all
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Genomic context

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See PTP4A3 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
14
Annotation release Status Assembly Chr Location
103 current rCheMyd1.pri.v2 (GCF_015237465.2) 2 NC_057850.1 (8976995..9145415)
102 previous assembly rCheMyd1.pri (GCF_015237465.1) 2 NC_051242.1 (8977050..9140628)

Chromosome 2 - NC_057850.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC122464201 Neighboring gene uncharacterized LOC122464202 Neighboring gene serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B Neighboring gene G protein-coupled receptor 20

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sea turtle fibropapilloma tumors share genomic drivers and therapeutic vulnerabilities with human cancers. Duffy DJ, et al. Commun Biol, 2018. PMID 30271945, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein tyrosine/serine/threonine phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in endothelial cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein tyrosine phosphatase type IVA 3
Names
Protein tyrosine phosphatase type IVA 3
protein tyrosine phosphatase type IVA, member 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chelonia mydas Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rCheMyd1.pri.v2 Primary Assembly

Genomic

  1. NC_057850.1 Reference rCheMyd1.pri.v2 Primary Assembly

    Range
    8976995..9145415
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037891918.2 → XP_037747846.1  protein tyrosine phosphatase type IVA 3 isoform X1

    UniProtKB/TrEMBL
    M7BAF9
    Conserved Domains (1) summary
    cd18535
    Location:5 → 158
    PTP-IVa3; protein tyrosine phosphatase type IVA 3

  2. XM_037891925.2 → XP_037747853.1  protein tyrosine phosphatase type IVA 3 isoform X1

    UniProtKB/TrEMBL
    M7BAF9
    Conserved Domains (1) summary
    cd18535
    Location:5 → 158
    PTP-IVa3; protein tyrosine phosphatase type IVA 3

  3. XM_037891917.2 → XP_037747845.1  protein tyrosine phosphatase type IVA 3 isoform X1

    UniProtKB/TrEMBL
    M7BAF9
    Related
    ENSCMYP00015007633.1, ENSCMYT00015009295.1
    Conserved Domains (1) summary
    cd18535
    Location:5 → 158
    PTP-IVa3; protein tyrosine phosphatase type IVA 3

  4. XM_043539019.1 → XP_043394954.1  protein tyrosine phosphatase type IVA 3 isoform X1

    UniProtKB/TrEMBL
    M7BAF9
    Conserved Domains (1) summary
    cd18535
    Location:5 → 158
    PTP-IVa3; protein tyrosine phosphatase type IVA 3

  5. XM_043539018.1 → XP_043394953.1  protein tyrosine phosphatase type IVA 3 isoform X1

    UniProtKB/TrEMBL
    M7BAF9
    Conserved Domains (1) summary
    cd18535
    Location:5 → 158
    PTP-IVa3; protein tyrosine phosphatase type IVA 3

  6. XM_037891924.2 → XP_037747852.1  protein tyrosine phosphatase type IVA 3 isoform X1

    UniProtKB/TrEMBL
    M7BAF9
    Conserved Domains (1) summary
    cd18535
    Location:5 → 158
    PTP-IVa3; protein tyrosine phosphatase type IVA 3

  7. XM_037891923.2 → XP_037747851.1  protein tyrosine phosphatase type IVA 3 isoform X1

    UniProtKB/TrEMBL
    M7BAF9
    Conserved Domains (1) summary
    cd18535
    Location:5 → 158
    PTP-IVa3; protein tyrosine phosphatase type IVA 3

  8. XM_037891921.2 → XP_037747849.1  protein tyrosine phosphatase type IVA 3 isoform X1

    UniProtKB/TrEMBL
    M7BAF9
    Conserved Domains (1) summary
    cd18535
    Location:5 → 158
    PTP-IVa3; protein tyrosine phosphatase type IVA 3

  9. XM_043539020.1 → XP_043394955.1  protein tyrosine phosphatase type IVA 3 isoform X1

    UniProtKB/TrEMBL
    M7BAF9
    Conserved Domains (1) summary
    cd18535
    Location:5 → 158
    PTP-IVa3; protein tyrosine phosphatase type IVA 3

  10. XM_043539021.1 → XP_043394956.1  protein tyrosine phosphatase type IVA 3 isoform X2

    Conserved Domains (1) summary
    cl28904
    Location:1 → 93
    PTP_DSP_cys; cys-based protein tyrosine phosphatase and dual-specificity phosphatase superfamily
Nucleotide Protein
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